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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Vang0032ss01000.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
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Family |
MYB |
Protein Properties |
Length: 390aa MW: 43856.4 Da PI: 7.1115 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Vang0032ss01000.1 | genome | SNU | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 49.2 | 1.2e-15 | 104 | 152 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
+g+W++eEd +l+d++ + G+g +W + +++ g++R++k+c++rw++yl
Vang0032ss01000.1 104 KGPWSPEEDRKLKDYIDKNGTGgNWIALPQKAGLKRCGKSCRLRWLNYL 152
79*********************************************97 PP
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2 | Myb_DNA-binding | 36.5 | 1.1e-11 | 159 | 201 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
g ++ eEd ++ + G++ W+ Ia+ ++ gRt++++k++w++
Vang0032ss01000.1 159 GDFSDEEDRIICSLYVNIGSR-WSIIAAQLP-GRTDNDIKNYWNT 201
679******************.*********.***********97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 390 aa
Download sequence Send
to blast |
LESVTILVAV PINSLVLFCV VFLSVSQTLD AFSLEKTNDR MCEPFYASQG LLFIRHKRYT 60 PNYHSDEKVR VWILRETDRG FSGNTQRERD MGRAPCCDKA SVKKGPWSPE EDRKLKDYID 120 KNGTGGNWIA LPQKAGLKRC GKSCRLRWLN YLRPNIKHGD FSDEEDRIIC SLYVNIGSRW 180 SIIAAQLPGR TDNDIKNYWN TKLKKKLIGL LPLSHHTKQP SFPSSALQNP PPSPSSHQLY 240 GEYGNYIPVT ASFTGMEHLS LPSANYESTT PSVSQTFYQN QDSMVSVSPM QCYYPVADSM 300 LMFGSEGSCS SSDGSCTQGR EMNHNLMLSY NTNDGDKSCV GGCFDQTLTP LDYDLEDIKQ 360 LISSSSSSLN NNNVDENKRE EKAMYCCYY*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015039 | 0.0 | AP015039.1 Vigna angularis var. angularis DNA, chromosome 6, almost complete sequence, cultivar: Shumari. |