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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Traes_7DS_366A869CF.3 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family |
M-type_MADS |
Protein Properties |
Length: 102aa MW: 11288.1 Da PI: 11.414 |
Description |
M-type_MADS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Traes_7DS_366A869CF.3 | genome | IWGSC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | SRF-TF | 75.7 | 3.5e-24 | 1 | 43 | 9 | 51 |
HHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
SRF-TF 9 rqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
rqvtfskRr g++KKAeEL vLCda+va+++fsstgkl ++s
Traes_7DS_366A869CF.3 1 RQVTFSKRRRGLFKKAEELAVLCDADVALVVFSSTGKLSQFAS 43
8**************************************9986 PP
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK356695 | 3e-68 | AK356695.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1038F17. |
GenBank | AM502891 | 3e-68 | AM502891.1 Triticum aestivum mRNA for MIKC-type MADS-box transcription factor WM24A (WM24A gene). |
GenBank | AM502892 | 3e-68 | AM502892.1 Triticum aestivum mRNA for MIKC-type MADS-box transcription factor WM24B (WM24B gene). |
GenBank | DQ022679 | 3e-68 | DQ022679.1 Triticum aestivum MADS box protein VRT-2 mRNA, complete cds. |
GenBank | DQ201166 | 3e-68 | DQ201166.1 Hordeum vulgare subsp. vulgare cultivar Dicktoo MADS box protein VRT-2 mRNA, complete cds. |
GenBank | DQ201168 | 3e-68 | DQ201168.1 Hordeum vulgare subsp. vulgare cultivar Morex MADS box protein VRT-2 mRNA, complete cds. |
GenBank | DQ512352 | 3e-68 | DQ512352.1 Triticum aestivum MADS-box transcription factor TaAGL36 (AGL36) mRNA, complete cds. |
GenBank | HQ588326 | 3e-68 | HQ588326.1 Brachypodium distachyon MADS-box (SVP) mRNA, complete cds. |