PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_5DS_903A67B97.2
Common Namewox2, WOX2
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WOX
Protein Properties Length: 322aa    MW: 34475.7 Da    PI: 10.6945
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_5DS_903A67B97.2genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox58.21.3e-1841100357
                            --SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
               Homeobox   3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 
                             R+t+tkeq+ +Le l+++  r+p+ae++++ +++l     ++ ++V++WFqN++a++++
  Traes_5DS_903A67B97.2  41 ARWTPTKEQVGVLEGLYRQgLRTPTAEQIQQVTARLqkhgPIEGKNVFYWFQNHKARQRQ 100
                            7*****************99****************99999*****************96 PP
2Wus_type_Homeobox108.92.9e-3540102365
      Wus_type_Homeobox   3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 
                            ++RWtPt+eQ+ +Le ly++GlrtP++e+iq++ta+L+++G ie+kNVfyWFQN+kaR+rq+q
  Traes_5DS_903A67B97.2  40 NARWTPTKEQVGVLEGLYRQGLRTPTAEQIQQVTARLQKHGPIEGKNVFYWFQNHKARQRQRQ 102
                            78***********************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5007110.2236101IPR001356Homeobox domain
SMARTSM003892.3E-438105IPR001356Homeobox domain
PfamPF000463.1E-1641100IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.603.1E-741100IPR009057Homeodomain-like
SuperFamilySSF466891.36E-1141106IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008284Biological Processpositive regulation of cell proliferation
GO:0009942Biological Processlongitudinal axis specification
GO:0010654Biological Processapical cell fate commitment
GO:0048825Biological Processcotyledon development
GO:0090451Biological Processcotyledon boundary formation
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    Send to blast
MESVEHQQQA ATRSRSPSLP AAPPSPPLSP NSAAAAALAN ARWTPTKEQV GVLEGLYRQG  60
LRTPTAEQIQ QVTARLQKHG PIEGKNVFYW FQNHKARQRQ RQKQQAFDYF SKQFRRPQPL  120
PVLHRPAAHP SLPPIPLHAP PPPPSHVSSA TTPDPPAPPA CNRQAMYGQQ PSYVTAAAAV  180
AATQAAANAS YYMQTQAQAP MLHPRVEAVA HDKAQTQAQA TMYHQAAAPN SAGTQQPRAL  240
QLPPAAGTHG PPAARSRRPE TLNLFPLHPT FAIPEKPRPA GIAGSATPTG PSASGSGSFS  300
WEPESPRGDA PLPLYDFFGA GR
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor which may be involved in developmental processes. {ECO:0000250}.
UniProtTranscription factor which may be involved in developmental processes. {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG7645790.0HG764579.1 Triticum aestivum mRNA for WOX homeodomain transcription factor (wox2 gene).
GenBankKF7188310.0KF718831.1 Triticum aestivum cultivar liangmai 4 WOX homeodomain transcription factor (WOX2) mRNA, complete cds.
GenBankKJ4593910.0KJ459391.1 Aegilops tauschii voucher AS2407 WOX homeodomain transcription factor mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020164536.10.0WUSCHEL-related homeobox 5-like
SwissprotA2WWU72e-58WOX5_ORYSI; WUSCHEL-related homeobox 5
SwissprotQ8LR862e-58WOX5_ORYSJ; WUSCHEL-related homeobox 5
TrEMBLA0A023R7590.0A0A023R759_AEGTA; WOX homeodomain transcription factor
TrEMBLA0A453JXU30.0A0A453JXU3_AEGTS; Uncharacterized protein
TrEMBLW0Z6800.0W0Z680_WHEAT; WOX homeodomain transcription factor
STRINGTraes_5DS_903A67B97.20.0(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP75093548
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59340.15e-19WUSCHEL related homeobox 2
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]