PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Traes_4BL_F3AB558D4.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | HSF | ||||||||
Protein Properties | Length: 91aa MW: 10093.1 Da PI: 9.2281 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 45 | 2.8e-14 | 46 | 91 | 2 | 47 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkh 47 Fl+k+y++++d+++++++sw++ gnsfv++d + f++++L+++Fkh Traes_4BL_F3AB558D4.1 46 FLTKVYDMVSDAATDKVMSWTDAGNSFVIWDAHAFERDLLSRHFKH 91 9********************************************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.10 | 2.8E-15 | 39 | 91 | IPR011991 | Winged helix-turn-helix DNA-binding domain |
SMART | SM00415 | 0.0031 | 42 | 91 | IPR000232 | Heat shock factor (HSF)-type, DNA-binding |
SuperFamily | SSF46785 | 5.71E-12 | 43 | 91 | IPR011991 | Winged helix-turn-helix DNA-binding domain |
Pfam | PF00447 | 6.0E-11 | 46 | 91 | IPR000232 | Heat shock factor (HSF)-type, DNA-binding |
PRINTS | PR00056 | 1.4E-6 | 46 | 69 | IPR000232 | Heat shock factor (HSF)-type, DNA-binding |
PRINTS | PR00056 | 1.4E-6 | 84 | 91 | IPR000232 | Heat shock factor (HSF)-type, DNA-binding |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 91 aa Download sequence Send to blast |
GFRSPHRHGL QQRLAXXXXX XXXXSSAGNA PAPVGPAPRP PEVAPFLTKV YDMVSDAATD 60 KVMSWTDAGN SFVIWDAHAF ERDLLSRHFK H |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional regulator that specifically binds DNA of heat shock promoter elements (HSE). {ECO:0000250}. |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK362997 | 2e-69 | AK362997.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, partial cds, clone: NIASHv2012C04. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020148069.1 | 2e-40 | heat stress transcription factor A-9-like | ||||
Refseq | XP_020148070.1 | 2e-40 | heat stress transcription factor A-9-like | ||||
Swissprot | Q10PR4 | 2e-22 | HSFA9_ORYSJ; Heat stress transcription factor A-9 | ||||
TrEMBL | A0A3B6IV77 | 1e-39 | A0A3B6IV77_WHEAT; Uncharacterized protein | ||||
TrEMBL | A0A446SAG7 | 1e-39 | A0A446SAG7_TRITD; Uncharacterized protein | ||||
TrEMBL | A0A446SAN6 | 1e-39 | A0A446SAN6_TRITD; Uncharacterized protein | ||||
TrEMBL | A0A446SAQ3 | 1e-39 | A0A446SAQ3_TRITD; Uncharacterized protein | ||||
STRING | Traes_4BL_F3AB558D4.1 | 1e-52 | (Triticum aestivum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP121 | 37 | 394 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G26150.1 | 5e-16 | heat shock transcription factor A2 |
Publications ? help Back to Top | |||
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