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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Tp57577_TGAC_v2_mRNA6376 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Trifolium
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Family |
MYB |
Protein Properties |
Length: 343aa MW: 39265.7 Da PI: 7.787 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Tp57577_TGAC_v2_mRNA6376 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 53.7 | 4.7e-17 | 28 | 76 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
rg+W++eEd +l+d++ ++G+g +W + +++ g++R++k+c++rw++yl
Tp57577_TGAC_v2_mRNA6376 28 RGPWSPEEDSKLKDYISKHGTGgNWISLPHKAGLKRCGKSCRLRWLNYL 76
89*********************************************97 PP
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2 | Myb_DNA-binding | 32.6 | 1.9e-10 | 83 | 141 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT...............-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 2 grWTteEdellvdavkqlGgg...............tWktIartmgkgRtlkqcksrwqk 46
g ++ eEd ++ + G++ +W+ Ia+ ++ gRt++++k++w++
Tp57577_TGAC_v2_mRNA6376 83 GDFSDEEDRIICSLYVNIGSRytftivlqlylsnskRWSIIAAQLP-GRTDNDIKNYWNT 141
679*******************************************.***********97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 343 aa
Download sequence Send
to blast |
LDIHSSKRSF LLREMGRAPC CDKTSVKRGP WSPEEDSKLK DYISKHGTGG NWISLPHKAG 60 LKRCGKSCRL RWLNYLRPNI KHGDFSDEED RIICSLYVNI GSRYTFTIVL QLYLSNSKRW 120 SIIAAQLPGR TDNDIKNYWN TKLKKKLMAL QFPTSSHQRK PQFPPFPSTH PFSNYFTTTH 180 TPFSDFQTIS LPSNNNYPNT SFNPFYQNQE SMISLNPSMQ YNNNMFMFGS EGSCSSSDGS 240 CKEIKQEEIG YHHMNSGGFD DYNNNNFMIN CNNGSVGENI NQYEEKTSGV GYGYNNGQSQ 300 TLTPLLDYGL EDIKQLISSD NKDFSVDEIH KSEENGMYYF HY*
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