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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Tp57577_TGAC_v2_mRNA10004 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Trifolium
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| Family |
TCP |
| Protein Properties |
Length: 409aa MW: 46046.4 Da PI: 9.8899 |
| Description |
TCP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Tp57577_TGAC_v2_mRNA10004 | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | TCP | 147.7 | 8e-46 | 115 | 265 | 2 | 133 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt..............ssssas 71
++kkdrhski+T++g+RdRRvRls+e+a++fFdLqd+LGfdk+s+t++WL++++k+aik+lt++ s+ss+s
Tp57577_TGAC_v2_mRNA10004 115 PVKKDRHSKIYTSQGLRDRRVRLSIEIARKFFDLQDMLGFDKASNTLDWLFTKSKKAIKDLTKSkqknknseggdatkSFSSSS 198
68**************************************************************88888888888877777778 PP
TCP 72 eceaesssssasnsssg.......kaaksaakskksqksaas.alnlakesrakarararertrekmrik 133
+ce+++ ++s s + ++ ++ + ++ + k++a+ n++kesr+karararert++k +++
Tp57577_TGAC_v2_mRNA10004 199 DCEDSEVAINDS-S--NlqmegvgSKFEERKLKRVQMKEPACvRANKMKESREKARARARERTSNKISNN 265
884433333333.2..233577866666666555555555551568888*****************9876 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 409 aa
Download sequence Send
to blast |
MFPYSSNPYP SFLPSSSSSS LFPFPFLNPE NASSNTNNNN NTLFLDPFSI PYIPTHHSHP 60
HHPNITNIPE TLNNLAVSQE NNNSNIAVSM PKQDPSTLGG SNSHYGISCF LTKKPVKKDR 120
HSKIYTSQGL RDRRVRLSIE IARKFFDLQD MLGFDKASNT LDWLFTKSKK AIKDLTKSKQ 180
KNKNSEGGDA TKSFSSSSDC EDSEVAINDS SNLQMEGVGS KFEERKLKRV QMKEPACVRA 240
NKMKESREKA RARARERTSN KISNNIRGVQ EVELKKKYEN NLQAFQQSRS SQDHQLVSSN 300
EGPRNDFNVI EESIVIKRKL KPSMMVSHHN HNHHHHHNHQ NHVIPKEATS FNNNGDYHFL 360
PNSSPNWDAN NGTSSTNRST FCAIASMNLS TGMSCVSVCV LFFIKNNC*
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