PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_26994-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family G2-like
Protein Properties Length: 535aa    MW: 59373 Da    PI: 4.4173
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_26994-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like53.55.4e-17142192555
          G2-like   5 rWtpeLHerFveaveqLGGsekAtPktilelmkvkg..LtlehvkSHLQkYRl 55 
                       W++eLHe+F++ave L G+  At ++i + m+ k+  Lt++hv+SHLQk+Rl
  TRIUR3_26994-P1 142 LWSSELHEKFLQAVEVL-GPS-ATARNIHQYMNAKDlnLTIQHVASHLQKHRL 192
                      5****************.776.9***********973369************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.88E-10141196IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.608.8E-16142196IPR009057Homeodomain-like
TIGRFAMsTIGR015574.7E-14143193IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 535 aa     Download sequence    Send to blast
MALHGSEPVL SIILSFLPLE TVEEALDSLK RGVAKNEELD LVVAEVHPGN AEMDTLVLFH  60
HILNALEVPL ITMCAYDEAV SARMTLGTCF NVVKPLDTET VNFLRMRALQ HRSIKNHRSE  120
TEDEKQDALN ANVYSENLGW FLWSSELHEK FLQAVEVLGP SATARNIHQY MNAKDLNLTI  180
QHVASHLQKH RLRAQRQRLS HDEEGYQHYA SMKEFSEMMS SAYKAPSAKP NNHLATTQTQ  240
FTHGVASSIW DMYPGMVWPH MEGSSAASAM WYNYPGKQWG QVGESSAGAR VSQTNARPPP  300
VLTHGTKSIW DWYRESLQYF NESLSYKREK DTKDDVHAAV TPQEDTMNEV HAAVTLQKDT  360
MDEAHAAVTL QKDTMDEAHA AVTPHEVNEV PAAAMGAGYL VDLAGNALLD GIDNYHPAAE  420
NAQSEPFSDW DWEEVEKFLT NQMEGPGQEQ QGIELVDLLQ VDGISPEELL QVDEAWNQAL  480
QQANPANVVE DEPMAEEPAA GDAPVSDPAN QSGVAGNVFG VWSPQFAGDD YGMPF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020157240.10.0uncharacterized protein LOC109742553
TrEMBLM7Z8A10.0M7Z8A1_TRIUA; Uncharacterized protein
STRINGTRIUR3_26994-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP130171928
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.11e-09response regulator 2