PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_18341-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bZIP
Protein Properties Length: 339aa    MW: 35879.5 Da    PI: 9.6413
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_18341-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_170.13.5e-22200262163
                      XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                      e+e+kre+rkq+NRe+ArrsR+RK+ae+eeL++ v++L+aeN++Lk+e+ +l+k ++kl+ e+
  TRIUR3_18341-P1 200 EREVKREKRKQSNRESARRSRLRKQAETEELATQVESLTAENTSLKSEIGKLTKSSEKLRIEN 262
                      799*******************************************************98776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077778.1E-29192IPR012900G-box binding protein, multifunctional mosaic region
Gene3DG3DSA:1.20.5.1703.3E-17195259No hitNo description
PfamPF001707.2E-21200262IPR004827Basic-leucine zipper domain
SMARTSM003381.2E-21200264IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.162202265IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.25E-11203258No hitNo description
CDDcd147021.96E-22205253No hitNo description
PROSITE patternPS000360207222IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009737Biological Processresponse to abscisic acid
GO:0005829Cellular Componentcytosol
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    Send to blast
MAHDEAVAAQ KTGKSGSPPK DQPAPSPYPD WSAMQAYYGS GVMPPAYFAP AIAAGHPPPP  60
YMWGPQHMMP PPFGAPYAMY PHGGAYPHPL VPMMASPLSV EPAKSANSKD KSSNKKLKEI  120
DGSAVSTGSG NSKKTSSSGD YSGEGSSDVN DLKCFPAPVI KPSVTNVANS RAIGTPVSPL  180
PGVMGPIHTG ISTELSSKDE REVKREKRKQ SNRESARRSR LRKQAETEEL ATQVESLTAE  240
NTSLKSEIGK LTKSSEKLRI ENSALVMKLK GTAAPTSAEM PLDKSAVAAP SSSPRVVENF  300
LSMIDDTSKS GVKNHMEHSE PKLRQLLGSS ATTDVVAAN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1216222RRSRLRK
2216223RRSRLRKQ
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00318DAPTransfer from AT2G46270Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT2254640.0KT225464.1 Triticum aestivum GBF1 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020151704.10.0common plant regulatory factor 1-like
RefseqXP_020151705.10.0common plant regulatory factor 1-like
TrEMBLM8AV530.0M8AV53_TRIUA; G-box-binding factor 3
STRINGTRIUR3_18341-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27763888
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36730.24e-32G-box binding factor 1