PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_02291-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family G2-like
Protein Properties Length: 402aa    MW: 44774 Da    PI: 6.2318
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_02291-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like106.91.1e-33236290155
          G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                      k r+rWtpeLHe+Fv+av++LGGsekAtPk++ ++mkv+gLt++hvkSHLQkYR+
  TRIUR3_02291-P1 236 KSRMRWTPELHEKFVDAVDKLGGSEKATPKAVQKVMKVEGLTIYHVKSHLQKYRT 290
                      68****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466896.45E-18233290IPR009057Homeodomain-like
PROSITE profilePS5129413.475233293IPR017930Myb domain
Gene3DG3DSA:1.10.10.602.2E-30234291IPR009057Homeodomain-like
TIGRFAMsTIGR015571.7E-25236290IPR006447Myb domain, plants
PfamPF002491.2E-10238289IPR001005SANT/Myb domain
PfamPF143798.4E-16320366IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 402 aa     Download sequence    Send to blast
TSIMSQFRNG EVPRFLSSDI NVVPVLSEVT VPSFPEYKTS YIERDMCGSS ITSFNTLCQP  60
YMSASNFTSD LCINNGSPKG KLSFGSHVIA ISGCDTSLPS AHSSYTGNPD YLRMVYPKVS  120
EEINWGQEPL PGVFEYPATI DVSDQRNVIV SQQSQDIITI DHITHLAKQK EWYSSGCSEQ  180
FLGSSGSGGS VLKAADANTT PPNYAYFHGQ KNRLSSFNVD ELCSDNLPCS DTTPTKSRMR  240
WTPELHEKFV DAVDKLGGSE KATPKAVQKV MKVEGLTIYH VKSHLQKYRT VRHQSESSDG  300
TSAERSNHMD EVCSQNMKHM EASEALRTQI GLQKQLHAQL ELQRKMQLQV EEHSKYLEMV  360
IARQGESLKQ LGALPRFQHS DAQAVDHKEA YREQTADTDS AE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A2e-27236294260Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B2e-27236294260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A2e-27236294260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C2e-27236294260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D2e-27236294260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F2e-27236294260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H2e-27236294260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J2e-27236294260Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020193221.10.0protein PHOSPHATE STARVATION RESPONSE 1 isoform X3
TrEMBLT1LCL30.0T1LCL3_TRIUA; Uncharacterized protein
STRINGTRIUR3_02291-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP54942526
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28610.17e-48phosphate starvation response 1