![PlantTFDB](images/title_pic.jpg) |
Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sphfalx0058s0021.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
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Family |
LFY |
Protein Properties |
Length: 319aa MW: 36518.9 Da PI: 8.0495 |
Description |
LFY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sphfalx0058s0021.1.p | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
![Signature Domain](draw_signature_domain.php?sp=Sfa&pid=Sphfalx0058s0021.1.p) |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | FLO_LFY | 465.8 | 3e-142 | 4 | 316 | 46 | 385 |
FLO_LFY 46 rklreleelfkayGvryltvakiaelGftvstLvdmkdeelddlmkslseifrldllvGeryGikaavraerrrleeeeaekkrrklls 134
++ r+l+elfk++Gv+ +t+a ++++GftvstL++mkd+e+d ++ks++e ++l+llvGe++Gikaavra+rr l+ee e++r +++
Sphfalx0058s0021.1.p 4 KENRRLKELFKEFGVQPATLALMGQMGFTVSTLMNMKDDEVDFIIKSMIEEYHLELLVGEQFGIKAAVRAKRRALDEEV-EQQRLDIVA 91
56899**********************************************************************9955.667766554 PP
FLO_LFY 135 edeetaldalsqeglseepvqeekeaagsggeglgeaelvaaeekkseeekkkaskkkqkrkkkkelkseededeeeeededeegsged 223
+ +s + + e+ + g g+ + +l++ +++ s++e+ k +kkkqk++++ke ged
Sphfalx0058s0021.1.p 92 RTGD---RKISPDDPTSETLL-L--KDGL-GTPRDALGLLGLTDQGSDSENIKVAKKKQKKRRSKE-------------------VGED 154
3332...34444443333221.2..2233.333466888888888888888888777777777766...................8999 PP
FLO_LFY 224 geerqrehPfivtepgevargkknGLDYLfdLyeqCrefLlqvqkiakerGekcPtkvtnqvfryakkagasyinkPkmrhYvhCYalh 312
g+er+rehPfivtepge a+gkknGLDYLfdLyeqC++fL +vq+iake+GekcPtkvtn+vfr+ak +ga yinkPkmr+YvhCYalh
Sphfalx0058s0021.1.p 155 GQERPREHPFIVTEPGEPAKGKKNGLDYLFDLYEQCGKFLEEVQQIAKEKGEKCPTKVTNEVFRHAKLTGAGYINKPKMRDYVHCYALH 243
***************************************************************************************** PP
FLO_LFY 313 cLdeeasnalrrafkergenvGawrqacykplvaiaarqgwdidavfnahprLsiWYvPtkLrqLChlerska 385
cLd e+snalr+ +kergenvG w+qacy+plv++a+ ++wdid +fn++++L+iWYvPtkLrqLCh+er k+
Sphfalx0058s0021.1.p 244 CLDMEQSNALRKVYKERGENVGQWCQACYYPLVSLARGNEWDIDDLFNRNEKLRIWYVPTKLRQLCHIERIKH 316
**********************************************************************886 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 319 aa
Download sequence Send
to blast |
MAGKENRRLK ELFKEFGVQP ATLALMGQMG FTVSTLMNMK DDEVDFIIKS MIEEYHLELL 60 VGEQFGIKAA VRAKRRALDE EVEQQRLDIV ARTGDRKISP DDPTSETLLL KDGLGTPRDA 120 LGLLGLTDQG SDSENIKVAK KKQKKRRSKE VGEDGQERPR EHPFIVTEPG EPAKGKKNGL 180 DYLFDLYEQC GKFLEEVQQI AKEKGEKCPT KVTNEVFRHA KLTGAGYINK PKMRDYVHCY 240 ALHCLDMEQS NALRKVYKER GENVGQWCQA CYYPLVSLAR GNEWDIDDLF NRNEKLRIWY 300 VPTKLRQLCH IERIKHGE*
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor. {ECO:0000250}. |
Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT5G61850.1 | 8e-86 | floral meristem identity control protein LEAFY (LFY) |