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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Solyc06g050520.1.1 |
Common Name | DREB1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
ERF |
Protein Properties |
Length: 301aa MW: 33301.4 Da PI: 4.6575 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Solyc06g050520.1.1 | genome | ITAG | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 62.1 | 1.3e-19 | 80 | 130 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
++y+GVr++ +g+WvAeIr+p+ r r +lg+fgta eAa a++ a+++++g
Solyc06g050520.1.1 80 CKYRGVRQRI-WGKWVAEIREPK----RgSRLWLGTFGTAIEAALAYDDAARAMYG 130
79*****998.**********83....46************************998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009737 | Biological Process | response to abscisic acid |
GO:0010286 | Biological Process | heat acclimation |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 301 aa
Download sequence Send
to blast |
MAIMDEAANM VCVPLDYSRK RKSRSRRDRT KNVEETLAKW KEYNEKLDNE GKGKPVRKVP 60 AKGSKKGCMR GKGGPENWRC KYRGVRQRIW GKWVAEIREP KRGSRLWLGT FGTAIEAALA 120 YDDAARAMYG PCARLNLPNY ACDSVSWATT SASASASDCT VASGFGEVCP VDGALHEADT 180 PLSSVKDEGT AMDIVEPTSI DEDTLKSGWD CLDKLNMDEM FDVDELLAML DSTPVFTKDY 240 NSDGKHNNMV SDSQCQEPNA VVDPMTVDYG FDFLKPGRQE DLNFSSDDLA FIDLDSELVV 300 *
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 17 | 22 | SRKRKS |
2 | 20 | 27 | RKSRSRRD |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AF500011 | 0.0 | Lycopersicon esculentum dehydration responsive element binding protein (DREB1) mRNA, complete cds |