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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Solyc06g016750.2.1 |
Common Name | LOC101265135 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
NF-YC |
Protein Properties |
Length: 447aa MW: 51510.8 Da PI: 8.8585 |
Description |
NF-YC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Solyc06g016750.2.1 | genome | ITAG | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NF-YC | 24.9 | 4.4e-08 | 342 | 430 | 11 | 99 |
NF-YC 11 ekatdfknhelPlarikkilkade.dvkmisaeaPvllskacelfileltlrswlhaeenkrr.tlkksdiaaavtrtdifdflvdivprd 99
+++++ + ++P r+++i+k ++ +++m+ ea l+ ka e f le+ r + +r+ + + ++++v++ fdfl d +p++
Solyc06g016750.2.1 342 DEKSESALYQFPHNRVHRIIKNENtEIRML-HEATFLVNKATEKF-LEIFCREAYSCSFLDRKsYVGYNHLSSVVSKRPRFDFLSDFIPQK 430
4555666789***********876266665.79***********9.68888877666666665168899*******************986 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 447 aa
Download sequence Send
to blast |
MPKKSNGNSD NHDRDEPEDF VIPSSSAESQ DADETDEESD DVQNVHKEYV SDTDKEDEEE 60 EEEEKVESSK VGNTNSRGRE EDLEVQKKVY RRKGKKIVDG CGLSESENLK IYTRKKKMIE 120 KEKEVEEKER NVGAKIATSK NDYSEKNMNA KKEDKVNEGK TAKNNGDSSR GGKNEKRNNK 180 DERREVEGET KLAKKGKSNG GSSHGSVIKK EENKKKKRTD ERERERERER ERERERERQS 240 AKKAKINGDS SQLKKEEKNM KKTQNKKEGD EEAEENLVKK SNSNGVASPA KKEKMKREKE 300 KKGKTNNGKV KDEAISNGTT KKNEEKKLKA KRKREDDEEE EDEKSESALY QFPHNRVHRI 360 IKNENTEIRM LHEATFLVNK ATEKFLEIFC REAYSCSFLD RKSYVGYNHL SSVVSKRPRF 420 DFLSDFIPQK VRAEDALAEI PKSAET*
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 227 | 237 | RERERERERER |