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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Solyc05g051180.1.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
ERF |
Protein Properties |
Length: 211aa MW: 23943.2 Da PI: 6.1462 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Solyc05g051180.1.1 | genome | ITAG | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 50.2 | 6.3e-16 | 49 | 99 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+y GVr ++ +g+++AeIrd + ng r++lg+f +aeeAa a+++ + ++g
Solyc05g051180.1.1 49 HYIGVRARP-WGKFAAEIRDSTRNG--IRVWLGTFNSAEEAALAYDQVAFLMRG 99
799******.**********44465..**********************99998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 211 aa
Download sequence Send
to blast |
MILKIQDEKQ SSDSVESSIS LEDTSSSDTY SFNKENGFHS ERPKKEIKHY IGVRARPWGK 60 FAAEIRDSTR NGIRVWLGTF NSAEEAALAY DQVAFLMRGP TTCLNFPVER VSKMLEETEI 120 CNFFKNGLSP AAALKEKHKR RSSSNISRKK KQKVNHEEEI NNNNNNNNNN VDNNNNNNNN 180 NNNNNNNVFT FEDLGSELLD ELLSEYSNSN *
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 136 | 149 | KHKRRSSSNISRKK |