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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Sof019849 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Saccharinae; Saccharum; Saccharum officinarum complex
|
| Family |
ERF |
| Protein Properties |
Length: 129aa MW: 14728.7 Da PI: 8.487 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PUT-157a-Saccharum_officinarum-65947 | PU_ref | plantGDB | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 36.6 | 1.1e-11 | 90 | 125 | 2 | 42 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeA 42
+y+GVr+++ + +W +eIrdp+ + r++lg+f + eA
Sof019849 90 QYRGVRRRP-WCKWSCEIRDPV----KgVRVWLGTFLY-AEA 125
69*******.**********75....44********99.555 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 129 aa
Download sequence Send
to blast |
MCGGAILAEL IPSAPARRGK GKQRKADDFE AAFREFDEDS EEDEEMMEAG EEVEVVSKPA 60
FVFRASSSLP TKPRARQEEQ PNRRRKPAQQ YRGVRRRPWC KWSCEIRDPV KGVRVWLGTF 120
LYAEAVGLV
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