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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sof019132 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Saccharinae; Saccharum; Saccharum officinarum complex
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Family |
bZIP |
Protein Properties |
Length: 145aa MW: 16104.5 Da PI: 10.2677 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
PUT-157a-Saccharum_officinarum-55565 | PU_ref | plantGDB | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 44.3 | 3.8e-14 | 29 | 74 | 5 | 50 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50
+r rrk++NRe+ArrsR+RK+++++ L+ v +L+ +Nk+L l+
Sof019132 29 RRKRRKESNRESARRSRLRKQQQLDDLTSQVNQLKDQNKQLSMALS 74
799**************************************96665 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 145 aa
Download sequence Send
to blast |
XSGTLSGSSQ GTQSSRSEDD LDLQTQMERR KRRKESNRES ARRSRLRKQQ QLDDLTSQVN 60 QLKDQNKQLS MALSITSQNL VAVQAQNSVL QTQKMELDSR LGALTEILWY MNSSTSTSTA 120 PTNPAMVNGF TTWSSASDIL GASAW
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 29 | 34 | RKRRKE |
2 | 41 | 47 | RRSRLRK |
3 | 41 | 48 | RRSRLRKQ |