 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Sof018748 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Saccharinae; Saccharum; Saccharum officinarum complex
|
| Family |
ERF |
| Protein Properties |
Length: 152aa MW: 16839.9 Da PI: 9.3366 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PUT-157a-Saccharum_officinarum-2222 | PU_ref | plantGDB | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 36.9 | 8.9e-12 | 91 | 140 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
+y GVr ++ +g W+A Irdp+ + r++lg+f + e + +++a++ l+g
Sof018748 91 QYMGVRLRP-WGTWAADIRDPV----QgVRVWLGTFPSSEANRLSYDHAARDLRG 140
599******.**********75....44**********9999999******9998 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 152 aa
Download sequence Send
to blast |
MCGGAILAEL IPSAPARRGG AAWPAGKGKQ RKADDFEAAF REFDEEMMEA GEEVEVVSQP 60
AFVLRASSFL PTKPRARQEE QPSLRRKPAQ QYMGVRLRPW GTWAADIRDP VQGVRVWLGT 120
FPSSEANRLS YDHAARDLRG PKAKLSCFSS CX
|
| Expression -- UniGene
? help Back to Top |
| UniGene ID |
E-value |
Expressed in |
| Sof.7356 | 1e-107 | bud| callus| crown| leaf| meristem| root| seed| stem |
