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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Sof013383 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Saccharinae; Saccharum; Saccharum officinarum complex
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Family |
ERF |
Protein Properties |
Length: 219aa MW: 23753.1 Da PI: 5.92 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
PUT-157a-Saccharum_officinarum-82892 | PU_ref | plantGDB | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 57.7 | 2.9e-18 | 32 | 81 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr+++ +g+W+AeIrdp+ + r++lg+f +ae Aa a+++a++ +g
Sof013383 32 QYRGVRRRP-WGKWAAEIRDPV----KgVRVWLGTFPSAEAAALAYDHAARDVRG 81
69*******.**********75....44**********************98776 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 219 aa
Download sequence Send
to blast |
PAFVFRASSS PPTKPRARQE EQPSRRRKPA QQYRGVRRRP WGKWAAEIRD PVKGVRVWLG 60 TFPSAEAAAL AYDHAARDVR GPRAKLNFPS SSSAAAGAPA SRKRARAADA IIDLVDQEEQ 120 EQRAAAAAAN LKHEAADESS GSGALPDFSW QGVSAAYDEV PALDVEADQS GDKKRPRTEP 180 ESTEDEASPR ASSGSEPDAL FDALLFGDQF AFFDARAYE
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