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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sobic.009G237600.1.p |
Common Name | Sb09g028990, SORBIDRAFT_09g028990 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
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Family |
bZIP |
Protein Properties |
Length: 383aa MW: 40592.3 Da PI: 7.7728 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sobic.009G237600.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 70.8 | 2.1e-22 | 244 | 306 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
e+elkre+rkq+NRe+ArrsR+RK+ae+eeL++ v++L++eN++L++e+ +l++ ++kl+ e+
Sobic.009G237600.1.p 244 ERELKREKRKQSNRESARRSRLRKQAETEELATQVESLTTENTSLRSEIGRLTESSEKLRLEN 306
89*********************************************************9887 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009737 | Biological Process | response to abscisic acid |
GO:0005829 | Cellular Component | cytosol |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 383 aa
Download sequence Send
to blast |
MAQDEAVATQ KTGNTASPSK DYPTPSPYPD WSTMQAYYGP GVLPPTYFAP AIAPGHPPPY 60 MWGPQPIMPP PFGTPYAAVY PHGGAYPHPL VPMMSTPLSM EPAKSANSKE KNSNKKLKEI 120 DRTAVSAGSG NSKRTMSSSE DYSAEGSSDV NDQKVNKTSR KQNSDDGPGA ETTTGANTEC 180 VLAPNHTMGN GAILPHHCFP APVIKPSATN VANSRVIGTA ISPSPSVMVP AHTALPADLS 240 VKDERELKRE KRKQSNRESA RRSRLRKQAE TEELATQVES LTTENTSLRS EIGRLTESSE 300 KLRLENSALM VKLKDTAALT PAEPSPHTAV TSSSSPGAAA ENFLSMIDSA KAAGVSRHTE 360 HGEPKLRQLL DSSPATDVAA VS*
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 260 | 266 | RRSRLRK |
2 | 260 | 267 | RRSRLRKQ |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT033625 | 0.0 | BT033625.1 Zea mays full-length cDNA clone ZM_BFc0117G20 mRNA, complete cds. |
GenBank | BT062784 | 0.0 | BT062784.1 Zea mays full-length cDNA clone ZM_BFb0346H09 mRNA, complete cds. |