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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sobic.009G101400.1.p |
Common Name | DREB2 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
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Family |
ERF |
Protein Properties |
Length: 337aa MW: 36174.3 Da PI: 4.828 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sobic.009G101400.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 63.6 | 4.1e-20 | 83 | 133 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
+gy+GVr++ +g+WvAeIr+p + r r +lg+f tae+Aa+a+++a+++++g
Sobic.009G101400.1.p 83 CGYRGVRQRT-WGKWVAEIREP---N-RvNRLWLGTFPTAEDAARAYDEAARAMYG 133
79*****999.**********8...2.489**********************9986 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009408 | Biological Process | response to heat |
GO:0009414 | Biological Process | response to water deprivation |
GO:0009651 | Biological Process | response to salt stress |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 337 aa
Download sequence Send
to blast |
MTLDQNQATP MQPPALQPGS RKKRPRRSRD GPTSVAAVIQ QWAEHNKQLE YAPEGSKRPR 60 KAPAKGSKKG CMRGKGGPDN TQCGYRGVRQ RTWGKWVAEI REPNRVNRLW LGTFPTAEDA 120 ARAYDEAARA MYGDLARTNF PRPHAATYAQ AALVSTSSQA APMAVGALWP GTSCESTTTS 180 NHSDIASTSH KPEASDSSSS LKAEWPEALE AGSSCIQAGT PSVADKVFGT LEPITKLPDG 240 GVTNLPDGGV INLPDGGDDC FDIGEMLSMM EADPHNEGGA DVGMGQPWCL DGLDSSVLES 300 MLQSEPEPFL MSEEQEMFLA GFESPSSFFE DLERLK*
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3' of the cis-acting dehydration-responsive element (DRE). Binding to the C-repeat/DRE element mediates high salinity- and dehydration-inducible transcription. Involved in drought and heat-shock stress tolerance. {ECO:0000269|PubMed:20049613}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By heat shock, high-salt and drought stresses. {ECO:0000269|PubMed:20049613}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | JF915839 | 0.0 | JF915839.1 Sorghum bicolor dehydration responsive element binding protein 2 isoform a (DREB2) mRNA, complete cds, alternatively spliced. |