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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sobic.003G085600.1.p |
Common Name | Sb03g007200, SORBIDRAFT_03g007200 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
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Family |
ERF |
Protein Properties |
Length: 345aa MW: 36625.9 Da PI: 4.5216 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sobic.003G085600.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 43.2 | 9.5e-14 | 122 | 160 | 3 | 46 |
AP2 3 ykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaa 46
y+GVr +k +g+W+AeIr + + kr +lg+f+t +Aa aa
Sobic.003G085600.1.p 122 YRGVRLRK-WGKWAAEIRNpF-----TgKRQWLGTFDT-AGAASAA 160
9*****99.**********55.....45**********.7777766 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 345 aa
Download sequence Send
to blast |
MAPLNHHQVL IKKALAKKPN STKRMTGFGL KPSAALLKSR PQQQPPAPVQ PRRRVRVLFE 60 DPDATDSDSD DEEEAAGAPT TGPATRTKLF SFEAYIGKAP AKPVLPAATV AACTSGGAPE 120 SYRGVRLRKW GKWAAEIRNP FTGKRQWLGT FDTAGAASAA YLSASRSFAD EKRRRRGQAV 180 PASASSPATS ASATPTASSS SSTSTAPFAH PSPSSVLEST TKAAAPNPES PEPVATPTPV 240 VLPPSTESAA QLPDDPEFYQ DLLRGLQLPD IDPMDFRAGL DALDVSDAAF CLDDEQDLLL 300 GDFGDEELEI DLDLDDINDV FPEMPGCDLG RGMDDFLQTV DFCV*
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