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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Sobic.001G384300.1.p |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
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| Family |
G2-like |
| Protein Properties |
Length: 444aa MW: 48490 Da PI: 6.0991 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sobic.001G384300.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 110.6 | 8e-35 | 225 | 279 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
k+r+rWtpeLHe+Fv+av+qLGGsekAtPk +l+lmkv+gLt++hvkSHLQkYR+
Sobic.001G384300.1.p 225 KQRMRWTPELHECFVDAVNQLGGSEKATPKGVLKLMKVDGLTIYHVKSHLQKYRT 279
79****************************************************8 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 444 aa
Download sequence Send
to blast |
MQSQKSRVLG AMSSSLPILP NPLKGSFPKP CNPQHIPMSR QLPDDSMPLR NDIHQSASLH 60
PRAGVIGAPY SGYSASPLDS VSNHDSQSMV APYISQSSSF ESFQSLSDTT PGTHTEAAWF 120
TSSMDVSPLY TDNIAAPDDN QIQSIRPAMT SDETAKQNDW WADIMNDDWK VILDATATDS 180
HSKAMIQTSN SATSLPAVNQ SASSHSMEIC PVASPPNSSN ASVAKQRMRW TPELHECFVD 240
AVNQLGGSEK ATPKGVLKLM KVDGLTIYHV KSHLQKYRTA RYKPDLSEGA SEKRTATEEL 300
VLDLKTSMDL TEALRLQMEV QKRLHEQLEI QRKLQLRIEE QGKYLQMMFE KQSQSSTDKV 360
QDPSSRDTVA KPSSTLSQSS NKDSGATMDP NGTGDSTKTA KLGERSSGSG VNQKLVEIES 420
DTEGGTDDGC KISQEKRHKL QDS*
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| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4k_A | 2e-30 | 224 | 283 | 1 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4k_B | 2e-30 | 224 | 283 | 1 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_A | 2e-30 | 224 | 283 | 1 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_C | 2e-30 | 224 | 283 | 1 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_D | 2e-30 | 224 | 283 | 1 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_F | 2e-30 | 224 | 283 | 1 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_H | 2e-30 | 224 | 283 | 1 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_J | 2e-30 | 224 | 283 | 1 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription factor involved in phosphate starvation signaling. Binds to P1BS, an imperfect palindromic sequence 5'-GNATATNC-3', to promote the expression of inorganic phosphate (Pi) starvation-responsive genes. Functionally redundant with PHR2 and PHR3 in regulating Pi starvation response and Pi homeostasis. {ECO:0000250|UniProtKB:Q10LZ1}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | JF831533 | 0.0 | JF831533.1 Zea mays isolate A phosphate starvation protein (PHR1) mRNA, complete cds. |
