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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Sme2.5_08423.1_g00001.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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Family |
ERF |
Protein Properties |
Length: 399aa MW: 44382 Da PI: 4.3146 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sme2.5_08423.1_g00001.1 | genome | EGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 63.8 | 3.7e-20 | 131 | 180 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+++GVr+++ +g+W+AeIrdp ++r r +lg+++taeeAa +++a+ kl+g
Sme2.5_08423.1_g00001.1 131 KFRGVRQRP-WGKWAAEIRDP---NRRVRLWLGTYDTAEEAAMVYDNAAIKLRG 180
89*******.**********8...335*************************99 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0042991 | Biological Process | transcription factor import into nucleus |
GO:0048366 | Biological Process | leaf development |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 399 aa
Download sequence Send
to blast |
MDHDMLSPIK YTEHRNVIRK VTKPPLAKSK KFPEASKSSQ YNPPVRRTVR ISVTDPDATD 60 SSSDEEDLLF GRRRVKKYIN EITIEPAVRS EVTIPNSCNG KTVNKRAPEA LQTKQKPMKV 120 QPPQSAGTVR KFRGVRQRPW GKWAAEIRDP NRRVRLWLGT YDTAEEAAMV YDNAAIKLRG 180 PDALTNFSTP PKPEAEPESE REPEISVPSQ ACYESGNESR NLASPTSVLR SRMSQSSAEQ 240 SRSDPVQASG ECPSVQESME CDQTVVAELV LESAVQQEGE VEECQGETNV IPDYSDDYLP 300 TDIPFLNDFF NFDVSAAEQT LFEDTTAAPT ATKPSCPNDF GSSDNNDTFP LDFLFNDADF 360 PNFDDAFPDL GALGVDDYFQ DNVVDNVVDY SSVDSLLAI
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