 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Sme2.5_04437.1_g00004.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
|
| Family |
ERF |
| Protein Properties |
Length: 271aa MW: 31339.8 Da PI: 4.7339 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sme2.5_04437.1_g00004.1 | genome | EGD | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 59.9 | 6.2e-19 | 74 | 124 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55
++++GVr+++ +g+W+AeIrd + r r++lg+f taeeAa +++a+ +++g
Sme2.5_04437.1_g00004.1 74 KKFRGVRQRP-WGKWAAEIRDpV-----RkMRIWLGTFETAEEAAMVYDQAAIQIRG 124
59********.**********44.....559***********************998 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 271 aa
Download sequence Send
to blast |
MNHNHNNFTP RVVRISYTDC DATDSSGDDE DDEKNGLTKY VTEIRFEKRD VRKSSNKKKK 60
KKKVVDLKKD ENVKKFRGVR QRPWGKWAAE IRDPVRKMRI WLGTFETAEE AAMVYDQAAI 120
QIRGPDALTN FIEPPSKKES MITSVSDYDS TGESENLCSP TSVLRHDDNN NNNNTNNNNF 180
DVDAGAKITK EEMDAERKRM EIAMQNDENG IMFDDSLPLM DQNFLKDFFD FRSPSPLMDD 240
VLLPFSLPEE LKFDENSKLD ENTWATGFYY S
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 56 | 62 | KKKKKKK |
| 2 | 58 | 68 | KKKKKVVDLKK |
