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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sme2.5_00009.1_g00032.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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Family |
ERF |
Protein Properties |
Length: 346aa MW: 38220.1 Da PI: 4.8084 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sme2.5_00009.1_g00032.1 | genome | EGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 61.5 | 1.8e-19 | 134 | 184 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
++++GVr+++ +g+W+AeIrdp r r +lg+++taeeAa +++a+ +l+g
Sme2.5_00009.1_g00032.1 134 KKFRGVRQRP-WGKWAAEIRDPL----RrVRLWLGTYDTAEEAAMVYDHAAIRLRG 184
59********.**********72....45*************************99 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0042991 | Biological Process | transcription factor import into nucleus |
GO:0048364 | Biological Process | root development |
GO:0048825 | Biological Process | cotyledon development |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0042802 | Molecular Function | identical protein binding |
Sequence ? help Back to Top |
Protein Sequence Length: 346 aa
Download sequence Send
to blast |
MDQQTMLSSG VKYTEHRKQI TMVRPSAPAG FTGRRRSSEM NAGGPRVVRI TVTDADATDS 60 SSDEAEEGFY GRQRVRKFVN EVRIEQSSNC NGSVNEVLRN GSSSGTAVTA APPKRRKKNA 120 GATAASKLKV NNVKKFRGVR QRPWGKWAAE IRDPLRRVRL WLGTYDTAEE AAMVYDHAAI 180 RLRGPDAPTN FATPPATAKT SCSSYNSGEE SHNDQRSPKS VLRCASTSFD ESQNNEEAEA 240 ESLPILPSEE SVKKNSDSRD ENDISMPETF CDFPPFESFF PDDLFQFENP VTISDLFEPT 300 TLPDCNNMLT LGSSTTDFGF GSSSWPEDDY FQDFGDIFGS DPLVAL
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