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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Sevir.9G039900.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family |
NAC |
Protein Properties |
Length: 444aa MW: 48017.9 Da PI: 6.9442 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sevir.9G039900.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 87.1 | 3.3e-27 | 223 | 355 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra......tksgyWkatg 87
+G+rF+Ptdeel+ +yL+ k +g+k+++ +++k++d+y+ +P++ ++++ + wy Fs+r++ky++g r+ r+ ++ gyWk+
Sevir.9G039900.1.p 223 AGVRFQPTDEELI-FYLRLKHAGHKMPV-DFFKDFDVYHEHPETSRAACGVVNGCWYAFSPRNRKYKNGGRPARSvfdasgVQVGYWKSNT 311
7************.**************.99*************98666666679*******************7688888889******* PP
NAM 88 kdkevlsk...kgelvglkktLvfykgrapkgektdWvmheyrl 128
k +vl+ +g+lvg ++L+f+ g++pkg++t W m+ey++
Sevir.9G039900.1.p 312 KLAPVLAGgkaDGALVGEVTSLTFHLGQQPKGTQTPWKMKEYAI 355
******976666667***************************86 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 444 aa
Download sequence Send
to blast |
MAEPPYYWHP QTQPGFPPRF APVPLPFAQG VMPPPVPVPV QITRAEPSYY HPQIQGSVAS 60 GSAAEAAAIV HAVPDTQKAQ EATAPAHRRR GRPRKTDTAA VAAAKPVIKK PKRATVRSSR 120 AAAPQPTGSS VAGSATMAGQ VQIHQQQDQA ASSVVEFQVQ HPDQAASVIA VATSSQQTAP 180 CTTNPMALLC DQEQWQLQPS CSNILSAGDQ AAAAGPYADT SVAGVRFQPT DEELIFYLRL 240 KHAGHKMPVD FFKDFDVYHE HPETSRAACG VVNGCWYAFS PRNRKYKNGG RPARSVFDAS 300 GVQVGYWKSN TKLAPVLAGG KADGALVGEV TSLTFHLGQQ PKGTQTPWKM KEYAIPQNQH 360 APDGSAMRLN DWVVCKLFYK ERVIKNAAAE EDQLSEAGEN DVWAEGDEGT WRVPVVQTLG 420 NSEQDLCVDY QIETNADDYL PWI*
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