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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Sevir.8G087600.1.p |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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| Family |
NF-YC |
| Protein Properties |
Length: 222aa MW: 24914 Da PI: 4.6776 |
| Description |
NF-YC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sevir.8G087600.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NF-YC | 77 | 2.6e-24 | 31 | 132 | 2 | 99 |
NF-YC 2 lksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkr.rtlkksdiaaavtrtdi 88
l fw k ie++ +f nh lP++ + ki++ ++ mis+e+P l+k e+fi eltlr+w+ a++ +r +t+ sdi +a+++ +
Sevir.8G087600.1.p 31 LDEFWRKTvedIENTMNFDNHILPMSYVAKIIRDNQGSLMISSETPSCLTKVLEIFIQELTLRAWMCAKSHDRsSTILESDIYEAINSKES 121
6789*987667999********************************************************999459*************** PP
NF-YC 89 fdflvdivprd 99
+ fl d+ r
Sevir.8G087600.1.p 122 YVFLNDVLQRL 132
******98775 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 222 aa
Download sequence Send
to blast |
MSNGSKERFG HPEELHGLPP TPLTSLQQKE LDEFWRKTVE DIENTMNFDN HILPMSYVAK 60
IIRDNQGSLM ISSETPSCLT KVLEIFIQEL TLRAWMCAKS HDRSSTILES DIYEAINSKE 120
SYVFLNDVLQ RLETNHTQAS MSSNAPQLHQ VHMESHFLAA TSTLKENGAM DPLTKPRDQA 180
FQIPKDNLVP AINAQPDPLE LKNDEDLTMS TTSSGSIEEA K*
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