 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Sevir.7G145900.2.p |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
|
Family |
NAC |
Protein Properties |
Length: 378aa MW: 41525.7 Da PI: 4.8991 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sevir.7G145900.2.p | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 92.5 | 6.8e-29 | 57 | 202 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra...... 77
lp+G++F+P+d el+ ++L+ k + + ++++ i+e+ +i++++P++Lp +k + ++++fF++ +++y g+rk+r+
Sevir.7G145900.2.p 57 LPAGVKFDPSDLELL-QHLQGKSNLPNstshalIDEFIPtIEEMeGICYTHPKNLP-DIKMDGSSLHFFHRVSNAYGCGHRKRRKisgddd 145
799************.889988776664555554443444999988**********.6777889********************8677777 PP
NAM 78 ...tksgyWkatgkdkevlskkgelvglkktLvfykgrapkge...ktdWvmheyrl 128
++ +W++tg ++++++++g ++g kk+Lv+y+g+++ g+ + +Wvmh+y+l
Sevir.7G145900.2.p 146 svfDERIRWHKTGASRAIYDENGVKKGWKKILVLYRGSRRGGSkidRDNWVMHQYHL 202
77655788***************************99888777334689******98 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 378 aa
Download sequence Send
to blast |
MASSWVMTGV GLIKKIRNAT QLISLRLGEL VAEPYIKCPN CKCGIDTSDV SLVWPALPAG 60 VKFDPSDLEL LQHLQGKSNL PNSTSHALID EFIPTIEEME GICYTHPKNL PDIKMDGSSL 120 HFFHRVSNAY GCGHRKRRKI SGDDDSVFDE RIRWHKTGAS RAIYDENGVK KGWKKILVLY 180 RGSRRGGSKI DRDNWVMHQY HLGADEDEPD GELVISKVFY QLPSKKNDKS EMGDVELESE 240 PSAAKIDPRT PMIHPPQSCL PNNSPCDTDQ YTPNQVDQQE ECSTSVCPVK VEAAECSAWS 300 AELSPAVVVA NLPAWDEPGQ PRDTTDPDPE PEAPIPVDGS NTDPFHGLPE LDTTFPCLGT 360 PSDCISLAVR HSVGLTG*
|