PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Sevir.7G039100.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family | ERF | ||||||||
Protein Properties | Length: 192aa MW: 21108.9 Da PI: 6.4087 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 27.4 | 8.5e-09 | 74 | 111 | 1 | 42 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeA 42 s+y+ V+w++ +g+W+AeIr + r +l f t e+A Sevir.7G039100.1.p 74 SKYHDVWWRP-WGKWAAEIRNpH-----CtMRKWLDIFNTIEDA 111 78999*****.**********44.....579*********8887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF54171 | 9.15E-9 | 74 | 114 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 9.1E-10 | 75 | 111 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 10.441 | 75 | 111 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 192 aa Download sequence Send to blast |
MILQKDPQTL LQLTIEAPVA CTCATCGADG CAGSGCELLA AARTGPSSDS DEEGSSPRPR 60 AMPPLPGAWR GRVSKYHDVW WRPWGKWAAE IRNPHCTMRK WLDIFNTIED AIPSMAPTST 120 YHRHHHLLQP LLESLHETYR SNASSPVHVA LAVAALVGQH STRLVPKEQD IWDGLNETMM 180 MDDGSFWSSI P* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Sevir.7G039100.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004954022.1 | 3e-63 | ethylene-responsive transcription factor ERF112 | ||||
TrEMBL | K3YV48 | 8e-62 | K3YV48_SETIT; Uncharacterized protein | ||||
STRING | Si018144m | 1e-62 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1242 | 36 | 124 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G16770.1 | 9e-11 | ethylene-responsive element binding protein |
Link Out ? help Back to Top | |
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Phytozome | Sevir.7G039100.1.p |