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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sevir.3G143000.2.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family |
bZIP |
Protein Properties |
Length: 374aa MW: 39693.2 Da PI: 9.1463 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sevir.3G143000.2.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 72 | 8.6e-23 | 234 | 296 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
e+elkre+rkq+NRe+ArrsR+RK+ae+eeL++ v++L+aeN++L++e+ +l++ ++kl+ e+
Sevir.3G143000.2.p 234 ERELKREKRKQSNRESARRSRLRKQAETEELATQVESLTAENTSLRSEIGRLTESSDKLRFEN 296
89********************************************************98766 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 374 aa
Download sequence Send
to blast |
MAHDEAVATQ KTGNTASSPK DQPAPSPYPD WSTMQAYYGH GVLPPTYFAP AIAPGHPPPY 60 MWGPQPLMPH PFGTPYAAMY PHGAAYPHPL VPMVSNPLSV EQTKSANSKE KSSSKKLKEI 120 DRTAVSAGSG NSKRTMSSSE DYSAEGSSDV NDQKVNKTSR KRSLVDGPGA ETSEAAKLAN 180 TAILPHHCFP APVIKPSATN VANSRAMGAT ISPSPGVIVP PHTGGPTDLS IKDERELKRE 240 KRKQSNRESA RRSRLRKQAE TEELATQVES LTAENTSLRS EIGRLTESSD KLRFENSALM 300 VKLKDTAAPT PAEPSPNKAA TSSSSPGAAA AENFLSMIDS TNAPGVSRHT EHGEPKLRQL 360 LDSNPSTDVA AVS*
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 250 | 256 | RRSRLRK |
2 | 250 | 257 | RRSRLRKQ |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT033625 | 1e-171 | BT033625.1 Zea mays full-length cDNA clone ZM_BFc0117G20 mRNA, complete cds. |
GenBank | BT062784 | 1e-171 | BT062784.1 Zea mays full-length cDNA clone ZM_BFb0346H09 mRNA, complete cds. |
GenBank | JX469957 | 1e-171 | JX469957.1 Zea mays subsp. mays clone UT3219 bZIP-type transcription factor mRNA, partial cds. |