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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Seita.5G022000.1.p |
Common Name | LOC101780694, SETIT_002845mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family |
ERF |
Protein Properties |
Length: 220aa MW: 23676.5 Da PI: 6.0502 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Seita.5G022000.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 61.4 | 2.1e-19 | 54 | 104 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56
+y+G+r+++ +g+W+AeIrdp+ + r++lg++ tae Aa+a+++a+++++g+
Seita.5G022000.1.p 54 QYRGIRQRP-WGKWAAEIRDPV----KgVRVWLGTYPTAEAAARAYDRAARRIRGA 104
6********.**********75....44*************************985 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 220 aa
Download sequence Send
to blast |
MCGGAIIFDY IPARRRVSAA DFWPDDSEAD AEDSHAPRAS DERAPRAKRG RKNQYRGIRQ 60 RPWGKWAAEI RDPVKGVRVW LGTYPTAEAA ARAYDRAARR IRGAKAKVNF PNDTSSSPVV 120 ASAVGARAAP PATAAQAPAV LPPPKTEAGV SEEVKELSEE LMAYENYMNF LGIPYMEGGS 180 AAAAAAPVAV EEPQAAVPTG LWSFEDYTYY PASLSLFTE*
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