|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Seita.2G138400.1.p |
Common Name | SETIT_031946mg |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
|
Family |
ERF |
Protein Properties |
Length: 276aa MW: 29428.2 Da PI: 6.3454 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Seita.2G138400.1.p | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 50.5 | 5e-16 | 117 | 166 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+ GVr ++ +g+++AeIrd + k +r++lg+f+++e Aa a+++a+ + +g
Seita.2G138400.1.p 117 FIGVRKRP-WGKFAAEIRDsT--R-KGARVWLGTFDSPEAAALAYDQAAFSVRG 166
57******.**********32..2.24**********************99887 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 276 aa
Download sequence Send
to blast |
MEQYASYLCS SSSYDIHHPA SGYGGAGTAL DAGGGGDDMQ RLLNELMLDM AESDYSFSDD 60 MEAASSADSS SSACSANDSH HHHHQQQRQQ PDDQNTASDS EKRSSSAAQQ AQRPATFIGV 120 RKRPWGKFAA EIRDSTRKGA RVWLGTFDSP EAAALAYDQA AFSVRGAAAV LNFPVERVQD 180 SLRALALSSS SSSSSSAAAW GSPVLALKSR HSIRKRSPNK NKKLPQHQRP QQQAAAVVAG 240 APQPQPAYPG SVVELEDLGA DYLDELLRVS SEPLH*
|