PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0710s0190.1.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family Nin-like
Protein Properties Length: 403aa    MW: 45473.6 Da    PI: 4.8148
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0710s0190.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK78.76.2e-25311359452
                  RWP-RK   4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                             +++l+d +++F+lpi+dAA++L++c+Tv+K+iCR++G+ RWPhRkiks+
  SapurV1A.0710s0190.1.p 311 KLTLNDFREFFHLPIEDAARKLELCPTVVKKICRKHGMTRWPHRKIKSI 359
                             79*********************************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5151917.405299379IPR003035RWP-RK domain
PfamPF020425.1E-22311359IPR003035RWP-RK domain
Sequence ? help Back to Top
Protein Sequence    Length: 403 aa     Download sequence    Send to blast
MADPRSVVPY NDPYESPIDY ENLNFMNDAN PSLAGLSSGN EPTSAIPESF SGNANANESI  60
LDPNDPYQDP MVWNFYNENL RVQSHEAGPS HQNQGQSSVG QIPNASFPNA SFLDASFPDA  120
SFFDASFPNA PIPDGQTSNA SGRSEEIFLE GRNIAVWPPE PVPFHCSCCQ VLREIIHTDG  180
NYTTKLEIHG RMGIICHAIL ENRDHVKATH PEHYMFDFCK KSLENVKDFL QKYCDERRQA  240
GFIMVQDPHT FFYEALCVGY EWMEDLQYDD FYDPSPSNSG EPQATNQAEG EIETERPTRS  300
NLALQRERAG KLTLNDFREF FHLPIEDAAR KLELCPTVVK KICRKHGMTR WPHRKIKSIL  360
RQLTDLKVLS NSIDAEERAR AQAETMRLQE EMRKACSGSA GL*
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0710s0190.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024458585.10.0uncharacterized protein LOC18100642
TrEMBLA0A2K2A6B30.0A0A2K2A6B3_POPTR; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF74782846
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24020.14e-14NIN like protein 7