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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
SapurV1A.0252s0390.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
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Family |
G2-like |
Protein Properties |
Length: 527aa MW: 57948.9 Da PI: 5.8738 |
Description |
G2-like family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
SapurV1A.0252s0390.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | G2-like | 107.8 | 6e-34 | 300 | 354 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
kpr+rWtpeLHe+Fveav++LGGse+AtPk +l+lmkv+gLt++hvkSHLQkYR+
SapurV1A.0252s0390.1.p 300 KPRMRWTPELHEAFVEAVNNLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRT 354
79****************************************************8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 527 aa
Download sequence Send
to blast |
MEARPAFSIQ RSGAKQLGNL GVSGHSGVLS SSLPLVPTPL EETCPKLPGS QQVSMERELM 60 TRPLVHASHL PYNNEVVGHL FSSSAGFSTD LQYSSVTPRE KHSRNTPFIS QSSANTASLL 120 MSQSSSQALL QSTTSSHYIN ENSASWCPEP LPGFLDFPTN TTIQNNQIES NSCAGVMASE 180 EFGKRNDWQE WADQLITDDD ALATNWNELL ADTSVADMEP KVGIFSQHTT NKIPLQQLVK 240 YYFMLSPVLI SLLQMAYQVS KPSSNIPVQH SQVHPQLPSP SAEIRPVLTP TSSANSAPTK 300 PRMRWTPELH EAFVEAVNNL GGSERATPKG VLKLMKVEGL TIYHVKSHLQ KYRTARYKPE 360 SSEGSSEKRL TSIDEISSLD LKTGIEITEA LQLQMEVQKR LHEQLEIQRN LQLRIEEQGR 420 HLQMMFEKQC KSGIDVVKAA SSALENPSTL SSDAIQDAPA KTELETAQVD CGKTPTDTIF 480 ASPALEEGSQ DLNRKHKVSQ TETPENSEPY NTDSSLQPAK RSRADA*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
6j4k_A | 8e-32 | 300 | 358 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 8e-32 | 300 | 358 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 8e-32 | 300 | 358 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 8e-32 | 300 | 358 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 8e-32 | 300 | 358 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 8e-32 | 300 | 358 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 8e-32 | 300 | 358 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 8e-32 | 300 | 358 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC211305 | 0.0 | AC211305.1 Populus trichocarpa clone POP004-I01, complete sequence. |