PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0013s0770.6.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family bZIP
Protein Properties Length: 312aa    MW: 33120.1 Da    PI: 9.3434
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0013s0770.6.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_168.69.9e-22198260163
                             XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                  bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                             e+elkrerrkq+NRe+ArrsR+RK+ae eeL+ kv++L +eN+aLk+e+++ +++++kl+ e+
  SapurV1A.0013s0770.6.p 198 ERELKRERRKQSNRESARRSRLRKQAEAEELACKVETLNTENMALKSEIDQFTEKSQKLRLEN 260
                             89*********************************************************9887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077773.5E-9132IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165963.0E-2865179No hitNo description
Gene3DG3DSA:1.20.5.1707.6E-17192257No hitNo description
PfamPF001703.6E-20198260IPR004827Basic-leucine zipper domain
SMARTSM003381.3E-20198262IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.691200263IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.75E-11201257No hitNo description
CDDcd147026.65E-19203252No hitNo description
PROSITE patternPS000360205220IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009737Biological Processresponse to abscisic acid
GO:0005829Cellular Componentcytosol
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    Send to blast
MWGPPQPMMA PYGAPYAAIY SHGGVYAHPA VPIGSHPHGP GVLSSPAANT PLSAETPTKS  60
SGNTDRGLMK KLKGFDGLAM SIGNGDAESA EGGSRLPQSM ETEGSSDGSD GNTARGKKRS  120
REGTPTVGGD KKIETNRGPL LGEVNPSTDK VLGAVVDPGM TTALELRNPS SVNVAKTNPA  180
TIPQPGVLLP SEGWVQNERE LKRERRKQSN RESARRSRLR KQAEAEELAC KVETLNTENM  240
ALKSEIDQFT EKSQKLRLEN AALMEKLKNA RLGPTQEMVL NNIDEQRNSN SGAKLHQLLD  300
ASPRADAVAA G*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1214220RRSRLRK
2214221RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00318DAPTransfer from AT2G46270Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0013s0770.6.p
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By light.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2080945e-45AC208094.1 Populus trichocarpa clone JGIACSB09-L10, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011037554.10.0PREDICTED: G-box-binding factor 3-like isoform X2
SwissprotQ990894e-95CPRF1_PETCR; Common plant regulatory factor 1
TrEMBLA0A3N7FZK40.0A0A3N7FZK4_POPTR; Uncharacterized protein
STRINGPOPTR_0014s08990.10.0(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46270.11e-81G-box binding factor 3
Publications ? help Back to Top
  1. Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K
    Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness.
    EMBO J., 1991. 10(7): p. 1777-86
    [PMID:2050115]
  2. Feldbrügge M,Hahlbrock K,Weisshaar B
    The transcriptional regulator CPRF1: expression analysis and gene structure.
    Mol. Gen. Genet., 1996. 251(6): p. 619-27
    [PMID:8757392]