PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SMil_00026607-RA_Salv
Common NameWRKY35
Organism
Salvia miltiorrhiza
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
Family WRKY
Protein Properties Length: 522aa    MW: 57356.9 Da    PI: 6.934
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SMil_00026607-RA_SalvgenomeNDCTCMView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.21.1e-30291349259
                            --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                   WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                            +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+
  SMil_00026607-RA_Salv 291 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCPVRKQVQRCAEDRTILITTYEGTHNHP 349
                            7*********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.9E-33275351IPR003657WRKY domain
SuperFamilySSF1182906.41E-28283351IPR003657WRKY domain
PROSITE profilePS5081129.562285351IPR003657WRKY domain
SMARTSM007741.8E-36290350IPR003657WRKY domain
PfamPF031061.2E-26292349IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 522 aa     Download sequence    Send to blast
LLFLSYLFRI RFIFMDRGWG LTLDNSDQVG FFGNKASFGV NLSPRRNSGF IMFPRGREEQ  60
PEHREVDFFA VKKEDSQAQP SAATDFHVNT GLQLVTANTG SDQSTVDDGV SYDGEDKRAK  120
NELAQLQIEL ERMNGENQRL RGMLSQVSGN YASLQMHLVT LMQHQQNSTT QEQEMDDKKC  180
EDERKENGGA RQFLELGPEQ SNSLSEERTV SGSPHQNNLE VTRNKRSGRE ESPESESWVP  240
GSKAPRLNNP NPNINTNTNT NTNTNTNQSI EATMRKARVS VRARSEAPMI SDGCQWRKYG  300
QKMAKGNPCP RAYYRCTMAV GCPVRKQVQR CAEDRTILIT TYEGTHNHPL PPAAMAMAST  360
TSAAASMLLS GSMPSADGLM NPNFLARTIL PCSSNMATIS ASAPFPTVTL DLTQSPNALQ  420
YQRPPPHFQV PFPVSAQNFA NQPAPQVFGQ ALYNQSKFSG LQMSKDVNEL PGQPQAQPQP  480
QPSFSDTLSA ATAAITADPN FTAALAAAIS SIIANTPNNN QP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A2e-22277353176WRKY transcription factor 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). Modulates phosphate homeostasis and Pi translocation by regulating PHO1 expression (PubMed:25733771). {ECO:0000250, ECO:0000269|PubMed:25733771}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00428DAPTransfer from AT4G04450Download
Motif logo
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKM8231580.0KM823158.1 Salvia miltiorrhiza WRKY protein (WRKY35) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011096037.10.0WRKY transcription factor 6
SwissprotQ9XEC31e-143WRK42_ARATH; WRKY transcription factor 42
TrEMBLA0A0D5YA100.0A0A0D5YA10_SALMI; WRKY protein
STRINGMigut.M01342.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA9452492
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G62300.11e-113WRKY family protein