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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
SMil_00022172-RA_Salv |
Common Name | WRKY56 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
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Family |
WRKY |
Protein Properties |
Length: 304aa MW: 34544 Da PI: 5.0101 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
SMil_00022172-RA_Salv | genome | NDCTCM | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 94.3 | 8.8e-30 | 154 | 212 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
+D ++WrKYGqK++kgs++prsYYrC+s+ gC ++k+ve+s +dp +++itY+ eH h+
SMil_00022172-RA_Salv 154 SDMWAWRKYGQKPIKGSPYPRSYYRCSSSkGCLARKQVEQSCTDPGMFIITYTAEHSHS 212
79*************************998****************************8 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 304 aa
Download sequence Send
to blast |
MSELVSDMAD WSLQAIVRGS SGEFGKMDMD GPDSFLQALT SDHHHQFDQD LRSSFPDIFE 60 GSTGSSGDEL EELYKPFYPA PVSHESLPDH TTLEFQEQEQ NAAEDKPSTH DQSDQSSVTS 120 PVASVTAVYT PKYKKRKNQH KRVVIQVSAE GLTSDMWAWR KYGQKPIKGS PYPRSYYRCS 180 SSKGCLARKQ VEQSCTDPGM FIITYTAEHS HSQPTRRNSL AGTVRQKFPS PKQDKTTENS 240 KSRQQQQQQP ELMDVKPRIK QEEDAKPSDE FDVSDFVFNE DFFSGLEEFD EFAQPFPVRP 300 CSWV
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KM823179 | 0.0 | KM823179.1 Salvia miltiorrhiza WRKY protein (WRKY56) mRNA, complete cds. |