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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
SMil_00015998-RA_Salv |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
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| Family |
LFY |
| Protein Properties |
Length: 387aa MW: 43441.8 Da PI: 6.2036 |
| Description |
LFY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| SMil_00015998-RA_Salv | genome | NDCTCM | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | FLO_LFY | 618.3 | 1.4e-188 | 1 | 372 | 1 | 386 |
FLO_LFY 1 mdpeafsaslfkwdpraaaaapparlleeaavseapleaaaaaaarklreleelfkayGvryltvakiaelGftvstLvdmkdeeldd 88
mdp+afsaslfkwdpra app+rlle + +++p+ aa ++ r+l +leelf+ayG+ry+t+akiaelGftv+tL+dm+deeld+
SMil_00015998-RA_Salv 1 MDPDAFSASLFKWDPRAGL-APPNRLLEAVVPPPPPAPAAYSMRPRELGGLEELFQAYGIRYFTAAKIAELGFTVNTLLDMRDEELDE 87
9**************9877.67889998888888888888888889999*************************************** PP
FLO_LFY 89 lmkslseifrldllvGeryGikaavraerrrleeeeaekkrrkllsedeetaldalsqeglseepvqeekeaagsggeglgeaelvaa 176
+m+sl++ifr+dllvGeryGikaavraerrrl+ee+ ++rr+lls d ++aldalsqeglseepvq+ekeaagsgg+g +e+v+a
SMil_00015998-RA_Salv 88 MMNSLCQIFRWDLLVGERYGIKAAVRAERRRLDEED--ARRRHLLSGDASHALDALSQEGLSEEPVQQEKEAAGSGGGG--VWEMVVA 171
**********************************88..99999********************************9999..9999999 PP
FLO_LFY 177 eekkseeekkkaskkkqkrkkkkelkseededeeeeededeegsgedgeerqrehPfivtepgevargkknGLDYLfdLyeqCrefLl 264
+ +k+ ++k++ k r ++ ++++e+d+d+e+e ed+e+ g +g+erqrehPfivtepgevargkknGLDYLf+LyeqCrefL+
SMil_00015998-RA_Salv 172 NGRKQRRRKSSC---KG-RSRMASMEEEDDDDDETEGAEDDENCGGGGNERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCREFLI 255
865433333222...33.33334445566777777778888999999***************************************** PP
FLO_LFY 265 qvqkiakerGekcPtkvtnqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafkergenvGawrqacykplvaiaarqg 352
qvq+iakerGekcPtk +++ga+yinkPkmrhYvhCYalhcLdee+snalrrafkergenvGawrqacykplva+aarqg
SMil_00015998-RA_Salv 256 QVQNIAKERGEKCPTKCSG-----TRRSGANYINKPKMRHYVHCYALHCLDEETSNALRRAFKERGENVGAWRQACYKPLVAVAARQG 338
****************987.....589************************************************************* PP
FLO_LFY 353 wdidavfnahprLsiWYvPtkLrqLChlerskas 386
wdida+fnahprLsiWYvPtkLrqLCh+ers+++
SMil_00015998-RA_Salv 339 WDIDAIFNAHPRLSIWYVPTKLRQLCHAERSTTA 372
******************************9875 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 387 aa
Download sequence Send
to blast |
MDPDAFSASL FKWDPRAGLA PPNRLLEAVV PPPPPAPAAY SMRPRELGGL EELFQAYGIR 60
YFTAAKIAEL GFTVNTLLDM RDEELDEMMN SLCQIFRWDL LVGERYGIKA AVRAERRRLD 120
EEDARRRHLL SGDASHALDA LSQEGLSEEP VQQEKEAAGS GGGGVWEMVV ANGRKQRRRK 180
SSCKGRSRMA SMEEEDDDDD ETEGAEDDEN CGGGGNERQR EHPFIVTEPG EVARGKKNGL 240
DYLFHLYEQC REFLIQVQNI AKERGEKCPT KCSGTRRSGA NYINKPKMRH YVHCYALHCL 300
DEETSNALRR AFKERGENVG AWRQACYKPL VAVAARQGWD IDAIFNAHPR LSIWYVPTKL 360
RQLCHAERST TAASSSITAA GVDHLPF
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| Functional Description ? help
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| Source |
Description |
| UniProt | Required for flower development. FLO may interact in a sequential manner with other homeotic genes affecting floral organ identity. |
| Best hit in Arabidopsis thaliana ? help
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| Hit ID |
E-value |
Description |
| AT5G61850.1 | 1e-141 | floral meristem identity control protein LEAFY (LFY) |
