![PlantTFDB](images/title_pic.jpg) |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
SMil_00008650-RA_Salv |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
|
Family |
LFY |
Protein Properties |
Length: 392aa MW: 44146.7 Da PI: 6.3629 |
Description |
LFY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
SMil_00008650-RA_Salv | genome | NDCTCM | View CDS |
|
Signature Domain? help Back to Top |
![Signature Domain](draw_signature_domain.php?sp=Smi&pid=SMil_00008650-RA_Salv) |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | FLO_LFY | 661.3 | 1.2e-201 | 1 | 377 | 1 | 386 |
FLO_LFY 1 mdpeafsaslfkwdpraaaaapparlleeaavseapleaaaaaaarklreleelfkayGvryltvakiaelGftvstLvdmkdeeldd 88
mdp+afsaslfkwdpra app+rlle + +++p+ aa ++ r++ +leelf+ayG+ry+t+akiaelGftv+tL+dm+deeld+
SMil_00008650-RA_Salv 1 MDPDAFSASLFKWDPRAGL-APPNRLLEAVVPPPPPAPAAYSMRPREMGGLEELFQAYGIRYFTAAKIAELGFTVNTLLDMRDEELDE 87
9**************9877.678899988888888888888889999***************************************** PP
FLO_LFY 89 lmkslseifrldllvGeryGikaavraerrrleeeeaekkrrkllsedeetaldalsqeglseepvqeekeaagsggeglgeaelvaa 176
+m+sl++ifr+dllvGeryGikaavraerrrl+ee+ ++rr+lls d ++aldalsqeglseepvq+ekeaagsgg+g +e+v+a
SMil_00008650-RA_Salv 88 MMNSLCQIFRWDLLVGERYGIKAAVRAERRRLDEED--ARRRHLLSGDASHALDALSQEGLSEEPVQQEKEAAGSGGGG--VWEMVVA 171
**********************************88..99999********************************9999..9999999 PP
FLO_LFY 177 eekkseeekkkaskkkqkrkkkkelkseededeeeeededeegsgedgeerqrehPfivtepgevargkknGLDYLfdLyeqCrefLl 264
+ +k+ ++k++ k + ++ ++++ee++d+e+e ed+e+ g +g+erqrehPfivtepgevargkknGLDYLf+LyeqCrefL+
SMil_00008650-RA_Salv 172 NGRKQRRRKSSC---KGR-SRMASMEEEEEDDDETEGAEDDENCGGGGNERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCREFLI 255
865443333322...333.3333344556666667777788889999***************************************** PP
FLO_LFY 265 qvqkiakerGekcPtkvtnqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafkergenvGawrqacykplvaiaarqg 352
qvq+iakerGekcPtkvtnqvfryakkaga+yinkPkmrhYvhCYalhcLdee+snalrrafkergenvGawrqacykplva+aarqg
SMil_00008650-RA_Salv 256 QVQNIAKERGEKCPTKVTNQVFRYAKKAGANYINKPKMRHYVHCYALHCLDEETSNALRRAFKERGENVGAWRQACYKPLVAVAARQG 343
**************************************************************************************** PP
FLO_LFY 353 wdidavfnahprLsiWYvPtkLrqLChlerskas 386
wdida+fnahprLsiWYvPtkLrqLCh+ers+++
SMil_00008650-RA_Salv 344 WDIDAIFNAHPRLSIWYVPTKLRQLCHAERSTTA 377
******************************9875 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0010077 | Biological Process | maintenance of inflorescence meristem identity |
GO:0010582 | Biological Process | floral meristem determinacy |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0031490 | Molecular Function | chromatin DNA binding |
GO:0042803 | Molecular Function | protein homodimerization activity |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
GO:0043621 | Molecular Function | protein self-association |
Sequence ? help Back to Top |
Protein Sequence Length: 392 aa
Download sequence Send
to blast |
MDPDAFSASL FKWDPRAGLA PPNRLLEAVV PPPPPAPAAY SMRPREMGGL EELFQAYGIR 60 YFTAAKIAEL GFTVNTLLDM RDEELDEMMN SLCQIFRWDL LVGERYGIKA AVRAERRRLD 120 EEDARRRHLL SGDASHALDA LSQEGLSEEP VQQEKEAAGS GGGGVWEMVV ANGRKQRRRK 180 SSCKGRSRMA SMEEEEEDDD ETEGAEDDEN CGGGGNERQR EHPFIVTEPG EVARGKKNGL 240 DYLFHLYEQC REFLIQVQNI AKERGEKCPT KVTNQVFRYA KKAGANYINK PKMRHYVHCY 300 ALHCLDEETS NALRRAFKER GENVGAWRQA CYKPLVAVAA RQGWDIDAIF NAHPRLSIWY 360 VPTKLRQLCH AERSTTAASS SITAAGVDHL PF
|
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Required for flower development. FLO may interact in a sequential manner with other homeotic genes affecting floral organ identity. |
Best hit in Arabidopsis thaliana ? help
Back to Top |
Hit ID |
E-value |
Description |
AT5G61850.1 | 1e-151 | floral meristem identity control protein LEAFY (LFY) |