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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Rsa1.0_05160.1_g00002.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Family |
bZIP |
Protein Properties |
Length: 372aa MW: 39994.3 Da PI: 9.7474 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Rsa1.0_05160.1_g00002.1 | genome | RGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 49.8 | 7.5e-16 | 289 | 331 | 5 | 47 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47
+r+rr++kNRe+A rsR+RK+a++ eLe +v++L++eN++L+
Rsa1.0_05160.1_g00002.1 289 RRQRRMIKNRESAARSRARKQAYTVELEAEVAKLKEENEELQR 331
79************************************99874 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009414 | Biological Process | response to water deprivation |
GO:0009651 | Biological Process | response to salt stress |
GO:0009738 | Biological Process | abscisic acid-activated signaling pathway |
GO:0010255 | Biological Process | glucose mediated signaling pathway |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0000976 | Molecular Function | transcription regulatory region sequence-specific DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 372 aa
Download sequence Send
to blast |
MNFKNNNNMG NEPPGGGGAL TRQGSIYSLT FDEFQSSLGK DFGSMNMDEL LKNIWTAEET 60 QAMSVAASTS GVIPLALGSQ EGLLPLQRQG SLTLPRTLST KTVDQVWKDL SGTNLTQSQS 120 QTLGEVTLEE FLVRAGVVRE EAQIAAKDVN VGFSVQASPQ VVPGLMGNLG AETVNHTQVQ 180 GSSLPLNVNG ARSTYQQQPI MPKQPGFGYG AQVGPGIRGG LMGLGDQSLT NNMGLVQGVV 240 GAVSPVTPLS ADGIGKSNGD SSSLSPSPYM FNGGVRGRKS GAVEKVVERR QRRMIKNRES 300 AARSRARKQA YTVELEAEVA KLKEENEELQ RKQPLCVLQA KIMEIQKNQE MEMMNIQGGA 360 KKRLRRTESG PW
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Functional Description ? help
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Source |
Description |
UniProt | Involved in ABA and stress responses and acts as a positive component of glucose signal transduction. Functions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter. {ECO:0000269|PubMed:11005831, ECO:0000269|PubMed:15361142, ECO:0000269|PubMed:16284313, ECO:0000269|PubMed:16463099}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Up-regulated by drought, salt, abscisic acid (ABA), cold and glucose. {ECO:0000269|PubMed:10636868, ECO:0000269|PubMed:11005831, ECO:0000269|PubMed:15361142, ECO:0000269|PubMed:16284313, ECO:0000269|PubMed:16463099}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | HE616527 | 0.0 | HE616527.1 Brassica napus mRNA for abscisic acid responsive elements-binding factor 2 (abf2 gene). |
Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT1G45249.1 | 1e-155 | abscisic acid responsive elements-binding factor 2 |