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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Rsa1.0_00534.1_g00007.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Family |
bZIP |
Protein Properties |
Length: 371aa MW: 39983.4 Da PI: 8.8009 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Rsa1.0_00534.1_g00007.1 | genome | RGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 43.3 | 8.1e-14 | 314 | 361 | 5 | 55 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55
+r+rr++kNRe+A rsR+RK+a++ eLe ++++L++ N++L+ + e +
Rsa1.0_00534.1_g00007.1 314 RRQRRMIKNRESAARSRARKQAYTLELEAEIEKLKKANQELRRKQAE---M 361
69***************************************955443...3 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009414 | Biological Process | response to water deprivation |
GO:0009651 | Biological Process | response to salt stress |
GO:0009738 | Biological Process | abscisic acid-activated signaling pathway |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:1900057 | Biological Process | positive regulation of leaf senescence |
GO:1903648 | Biological Process | positive regulation of chlorophyll catabolic process |
GO:0005634 | Cellular Component | nucleus |
GO:0000976 | Molecular Function | transcription regulatory region sequence-specific DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 371 aa
Download sequence Send
to blast |
MGTHINFNNL GGGGDPGGEG FNQMKPTDSA YPLARQSSLY SLTFDELQTT LLGGPGKDLG 60 SMNMDELLKS IWTAEESQAM AMTMTSSAQA TAVTQQPGGG GGGGNLQRQG SLTLPRTISQ 120 KTVDEVWKFL ITKDEGGSSG GGGGESNAPQ RQQTLGEMTL EEFLFRAGVV REDNNSSQQM 180 GQVGNNNNSN GFYGNNGAPV GLGFEFGQQN HNSISFNNGA NDSMILNQPP GLGLKVGGTM 240 QQQQQLNQPH PQQQRVPQII FPKQANFAFA APGVTAAATS PGTSSAENNS LSPVDYVLNR 300 GRRSNTGLEK VIERRQRRMI KNRESAARSR ARKQAYTLEL EAEIEKLKKA NQELRRKQAE 360 MVEMQKNEVA V
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Functional Description ? help
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Source |
Description |
UniProt | Functions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter. {ECO:0000269|PubMed:11005831, ECO:0000269|PubMed:11884679, ECO:0000269|PubMed:15361142, ECO:0000269|PubMed:16463099}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Up-regulated by drought, salt, abscisic acid (ABA) and cold. {ECO:0000269|PubMed:10636868, ECO:0000269|PubMed:11005831, ECO:0000269|PubMed:16284313, ECO:0000269|PubMed:16463099}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | JQ971974 | 1e-104 | JQ971974.1 Eutrema salsugineum abscisic acid responsive elements-binding factor 4 (ABF4) mRNA, complete cds. |
Publications
? help Back to Top |
- Gao S, et al.
ABF2, ABF3, and ABF4 Promote ABA-Mediated Chlorophyll Degradation and Leaf Senescence by Transcriptional Activation of Chlorophyll Catabolic Genes and Senescence-Associated Genes in Arabidopsis. Mol Plant, 2016. 9(9): p. 1272-1285 [PMID:27373216] - Fernando VCD,Al Khateeb W,Belmonte MF,Schroeder DF
Role of Arabidopsis ABF1/3/4 during det1 germination in salt and osmotic stress conditions. Plant Mol. Biol., 2018. 97(1-2): p. 149-163 [PMID:29680877] - Muñiz García MN,Cortelezzi JI,Fumagalli M,Capiati DA
Expression of the Arabidopsis ABF4 gene in potato increases tuber yield, improves tuber quality and enhances salt and drought tolerance. Plant Mol. Biol., 2018. 98(1-2): p. 137-152 [PMID:30143991]
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