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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Rsa1.0_00320.1_g00008.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Family |
bZIP |
Protein Properties |
Length: 401aa MW: 43566.4 Da PI: 10.2559 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Rsa1.0_00320.1_g00008.1 | genome | RGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 39.9 | 9.3e-13 | 323 | 375 | 5 | 57 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57
+r+rr++kNRe+A rsR+RK+a++ eLe ++++L++ N++L+ + e+ ++ +
Rsa1.0_00320.1_g00008.1 323 RRQRRMIKNRESAARSRARKQAYTLELEAEIEKLKKVNQELQRKQAEMMEMQK 375
69***************************************876666655544 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 401 aa
Download sequence Send
to blast |
MGTHINFNNL GGGGGGSNQM KPTDTAYPLA RQSSLYSLTF DELQSTLGGP GKDFGSMNMD 60 ELLKSIWTAE EAQAMTMNPP SSSSSAAAAA TAVAQPGGGG GIPLQRQGSL TLPRTISQKT 120 VDEVWKCLFT KDGNMVGSSG GESNAPQRQQ TLGEITLEEF LFRAGVVRED NCSQQVGGNS 180 SNNGFYGNNG AAAGGLGFGF GQPNQNNISF NGTIQQQTQQ QFQQQPQQQL QQPRQQLNQP 240 HPQQQQQQHP HQRLPQTIFP KQAFAGNNNN NGLGSFGGGG VTVAAAATSP GTSSAENNSL 300 SPVPYVLNRG RRSNTGLEKV IERRQRRMIK NRESAARSRA RKQAYTLELE AEIEKLKKVN 360 QELQRKQAEM MEMQKNELKE TSKQPWGSKR QCLRRTLTGP W
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Functional Description ? help
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Source |
Description |
UniProt | Functions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter. {ECO:0000269|PubMed:11005831, ECO:0000269|PubMed:11884679, ECO:0000269|PubMed:15361142, ECO:0000269|PubMed:16463099}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Up-regulated by drought, salt, abscisic acid (ABA) and cold. {ECO:0000269|PubMed:10636868, ECO:0000269|PubMed:11005831, ECO:0000269|PubMed:16284313, ECO:0000269|PubMed:16463099}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | JX122894 | 1e-170 | JX122894.1 Brassica napus ABA-responsive element binding factor 4 (ABF4.1) mRNA, complete cds. |
Publications
? help Back to Top |
- Gao S, et al.
ABF2, ABF3, and ABF4 Promote ABA-Mediated Chlorophyll Degradation and Leaf Senescence by Transcriptional Activation of Chlorophyll Catabolic Genes and Senescence-Associated Genes in Arabidopsis. Mol Plant, 2016. 9(9): p. 1272-1285 [PMID:27373216] - Fernando VCD,Al Khateeb W,Belmonte MF,Schroeder DF
Role of Arabidopsis ABF1/3/4 during det1 germination in salt and osmotic stress conditions. Plant Mol. Biol., 2018. 97(1-2): p. 149-163 [PMID:29680877] - Muñiz García MN,Cortelezzi JI,Fumagalli M,Capiati DA
Expression of the Arabidopsis ABF4 gene in potato increases tuber yield, improves tuber quality and enhances salt and drought tolerance. Plant Mol. Biol., 2018. 98(1-2): p. 137-152 [PMID:30143991]
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