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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Rsa1.0_00114.1_g00020.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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| Family |
ERF |
| Protein Properties |
Length: 296aa MW: 32740.6 Da PI: 8.007 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Rsa1.0_00114.1_g00020.1 | genome | RGD | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 55.3 | 1.6e-17 | 57 | 106 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr+++ +gr++AeIrdp + r +lg+f+taeeAa a++ a+++++g
Rsa1.0_00114.1_g00020.1 57 RYRGVRRRP-WGRYAAEIRDPM----SkERRWLGTFDTAEEAACAYDCAARAMRG 106
59*******.**********84....35999**********************98 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009733 | Biological Process | response to auxin |
| GO:0009880 | Biological Process | embryonic pattern specification |
| GO:0048825 | Biological Process | cotyledon development |
| GO:0051726 | Biological Process | regulation of cell cycle |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 296 aa
Download sequence Send
to blast |
MEEAIMRLEG AEHRETNNHS LKRKPSRTSS TAPGSPGGVT IAKAAPGGGA SGGTSIRYRG 60
VRRRPWGRYA AEIRDPMSKE RRWLGTFDTA EEAACAYDCA ARAMRGLKAR TNFVYPIPSL 120
DSFHHRLFSP PPMNMFLLRD VLNSQPLSPF AYPHCNISNV SGFVNEPFTN VNDVSEDRSP 180
KAKRSSTIDN DNMVSILQPE PTGSGLLQEV VQGFLPKPIS QQTSTPPKTN QPIVLENGFQ 240
TDLGLPDHVN VEGNGFNQVK YHGELGWTDH VSGFDSAKMY QNGNAGMFYQ YCFHDY
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Required for correct embryo patterning and cotyledon organogenesis. May regulate positively the gibberellin signaling pathway leading to germination, hypocotyl elongation, and leaf expansion. Involved in the cytokinin signaling pathway that promotes shoot regeneration, probably through transcriptional activation of target genes such as CUC1. Acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250, ECO:0000269|PubMed:16339853, ECO:0000269|PubMed:17056621, ECO:0000269|PubMed:17376809}. |
| Publications
? help Back to Top |
- Chandler JW,Werr W
Arabidopsis floral phytomer development: auxin response relative to biphasic modes of organ initiation.
J. Exp. Bot., 2014. 65(12): p. 3097-110
[PMID:24744428] - Thoma R,Chandler JW
Polarity in the early floral meristem of Arabidopsis.
Plant Signal Behav, 2015. 10(4): p. e992733
[PMID:25806573] - Comelli P,Glowa D,Chandler JW,Werr W
Founder-cell-specific transcription of the DORNRÖSCHEN-LIKE promoter and integration of the auxin response.
J. Exp. Bot., 2016. 67(1): p. 143-55
[PMID:26428063] - Seeliger I, et al.
The AP2-type transcription factors DORNRÖSCHEN and DORNRÖSCHEN-LIKE promote G1/S transition.
Mol. Genet. Genomics, 2016. 291(5): p. 1835-49
[PMID:27277595] - Chandler JW,Werr W
DORNRÖSCHEN, DORNRÖSCHEN-LIKE, and PUCHI redundantly control floral meristem identity and organ initiation in Arabidopsis.
J. Exp. Bot., 2017. 68(13): p. 3457-3472
[PMID:28859377] - Durán-Medina Y,Serwatowska J,Reyes-Olalde JI,de Folter S,Marsch-Martínez N
The AP2/ERF Transcription Factor DRNL Modulates Gynoecium Development and Affects Its Response to Cytokinin.
Front Plant Sci, 2017. 8: p. 1841
[PMID:29123539]
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