PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.6G238600.1.p
Common NamePRUPE_ppa015363mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 357aa    MW: 40456.4 Da    PI: 8.1324
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.6G238600.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM163.67.4e-51131401128
                 NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 
                         lp+GfrFhP+deel+v+yLk+kv++++l++ ++i+e+d+yk++Pw+Lp+k++ +e+ewyfF++rd+ky++g+r+nra+  gyWkatg+dk+
  Prupe.6G238600.1.p  13 LPAGFRFHPSDEELIVHYLKNKVTSSPLPA-TIITELDLYKYNPWELPAKASFGEEEWYFFTPRDRKYPNGSRPNRAAGLGYWKATGTDKH 102
                         799***************************.89***************998999************************************* PP

                 NAM  92 vlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                         ++s+ +++ +g+kk Lvfy+g+ pkg+kt+W+m+eyrl
  Prupe.6G238600.1.p 103 IFSScGTKSIGVKKALVFYTGHPPKGVKTEWIMNEYRL 140
                         ***988889***************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.14E-609167IPR003441NAC domain
PROSITE profilePS5100558.0913167IPR003441NAC domain
PfamPF023651.3E-2514140IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 357 aa     Download sequence    Send to blast
MEREQQTSDN IQLPAGFRFH PSDEELIVHY LKNKVTSSPL PATIITELDL YKYNPWELPA  60
KASFGEEEWY FFTPRDRKYP NGSRPNRAAG LGYWKATGTD KHIFSSCGTK SIGVKKALVF  120
YTGHPPKGVK TEWIMNEYRL LDTTMWSSKQ KGSMRLDDWV LCRVRQKCNG SRSIWEDQNS  180
PPSYKLGAYT KQADEKCSKD TNPSIEMVRN YLYKDCPMLP YIFASPELPY TKTTSSISFL  240
GSGDTKSCTT IHENDSSNKN NGQLLASSLE SLINPFKRKP AAEGNGHHQS FVTPSKRICS  300
REYQEEVSTS IGRDGCSMNF WGVDHSGSAE NNFNADQWSS MIQYQELSQL IGFQCK*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A1e-6611693170Stress-induced transcription factor NAC1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.6G238600.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007206224.10.0NAC transcription factor 29
TrEMBLM5WDR20.0M5WDR2_PRUPE; Uncharacterized protein
STRINGEMJ074230.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF24162981
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15510.12e-79NAC domain containing protein 2