PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.3G002300.1.p
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 595aa    MW: 64686.1 Da    PI: 6.9078
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.3G002300.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.53.8e-30321379259
                         --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                         +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r aed++++++tYeg+H h+
  Prupe.3G002300.1.p 321 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAnGCPVRKQVQRLAEDKTILITTYEGNHSHP 379
                         7***************************999***************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.3E-32305381IPR003657WRKY domain
SuperFamilySSF1182904.84E-27313381IPR003657WRKY domain
PROSITE profilePS5081129.195315381IPR003657WRKY domain
SMARTSM007741.5E-35320380IPR003657WRKY domain
PfamPF031061.4E-26322379IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 595 aa     Download sequence    Send to blast
MEKQGRRHHI SSKLFHHSVP DCSFNVSDDG LLVDATNNTS SSNPSIPIPI PIKQLFRQTK  60
EIKEMDFFSD NNIMNDDADD DEEPRRQPQQ DCNNNPPAVN TGLNLLTLNS GISSTSASDI  120
HQNSNNKLMT SLQVELERLH EENGELKTTL DQMTKSYSQL QAQLLIAMQK QAQNRLREPI  180
KCEANGMLAR QFMDPRPSAA AAIDHVRDPS VAFSSGKTPA DHEAFSLFAP SNLNIEVMST  240
ERDQYQRRLQ TNINCAEEAL DRSSQCLGSP NYTSKSSDPN LLDDDNDEPK RSTDQVPVAD  300
QVPFRKARVS VRARSEAPMI SDGCQWRKYG QKMAKGNPCP RAYYRCTMAN GCPVRKQVQR  360
LAEDKTILIT TYEGNHSHPL PPAATAMANT TSAAAAMLLS GSTTSKEAHQ YHHHHLANSG  420
FFSNSQLPFF ASSMATLSAS APFPTITLDL TQSPMQQFHR IPPPSSSTFP LPLHGYHQLM  480
GGLGHPIQAP MYFPPNYKAP PPSAGLSLSG GQRSTSTHSS GMIETVSAAI ASDPNFTAAL  540
AEAISTIMAA PRPHQGHQGG ININDGDIAN NNAARGVVAS TNNSPPSANI GVRS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A4e-21307383176WRKY transcription factor 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.3G002300.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020414308.10.0probable WRKY transcription factor 47
TrEMBLA0A251PT050.0A0A251PT05_PRUPE; Uncharacterized protein
STRINGXP_008227774.10.0(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF104392541
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G62300.13e-68WRKY family protein