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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Potri.014G094200.1 |
Common Name | POPTR_0014s08990g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family |
bZIP |
Protein Properties |
Length: 409aa MW: 44331 Da PI: 8.3518 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Potri.014G094200.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 69.9 | 3.8e-22 | 296 | 358 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
++elkrerrkq+NRe+ArrsR+RK+ae eeL+ kv++L++ N++Lk+e+++ +++++kl+ e+
Potri.014G094200.1 296 DRELKRERRKQSNRESARRSRLRKQAEAEELAHKVETLTTVNMTLKSEIDQFTEKSQKLRLEN 358
689********************************************************9887 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 409 aa
Download sequence Send
to blast |
MILSVRELKQ FWRIISKLSK DFYFFWCFTM GNNEEGKSSA SDKSSPAQQD QTSIHVYPDW 60 AAIQAYYGSR VALPPYYNSG VASGHAPHPY MWGPPQPMMA TYGAPYAAIY SHGGVYAHPA 120 VPILEIQKLI CLHCVSICNS CTIMQAHTPL SAETPTKSSG NTDQGLMKKL KGFDGLAMSI 180 GNGDAESAEG GSRLPQSMET EGSSDGSDGN TARGKKRSRE GTPTVGGDTK TETHCSPLLG 240 EVNPSTDKVL GAVVDPGMTK ALELRNPPSV NVAKTNPATI PQPGAMLPSE AWSPNDRELK 300 RERRKQSNRE SARRSRLRKQ AEAEELAHKV ETLTTVNMTL KSEIDQFTEK SQKLRLENAA 360 LTKLKNAQLG PTQEIILNNI DEQRSSNSGA KLHQLMDASP RADAVAAG*
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 312 | 318 | RRSRLRK |
2 | 312 | 319 | RRSRLRKQ |
Functional Description ? help
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Source |
Description |
UniProt | Binds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By light. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC208094 | 4e-49 | AC208094.1 Populus trichocarpa clone JGIACSB09-L10, complete sequence. |