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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Potri.011G061700.1 |
Common Name | POPTR_0011s06010g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family |
ERF |
Protein Properties |
Length: 270aa MW: 30073 Da PI: 10.238 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Potri.011G061700.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 58 | 2.4e-18 | 148 | 198 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr+++ +g+++AeIrd + r +r++lg+f tae Aa a+++a+ +++g
Potri.011G061700.1 148 HYRGVRRRP-WGKYAAEIRDSK----RhgARIWLGTFETAEAAALAYDRAAFNMRG 198
8********.**********42....235*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 270 aa
Download sequence Send
to blast |
MTCYNRMSRQ KDDMNTIHWY SCAFSPCKIT GERYLPGANS SMPRAYKLKF KYKSRAPFCT 60 LQASSRNPKI PRNQLQPNPL PSNKQTMVLS SQIHELPFNE NDSQDMVIYQ MINEASAPNS 120 STYNILPRSQ INTSGMLQPA RTVIAKKHYR GVRRRPWGKY AAEIRDSKRH GARIWLGTFE 180 TAEAAALAYD RAAFNMRGSK ALLNFPAEVV AAISTQNCQP IFSSTRTSSK KAMDSCGSSS 240 TITIATSQSE SESSTSGESR RQGSDILEN*
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Functional Description ? help
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Source |
Description |
UniProt | Acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. Activates plants defense genes. Can confer resistance to Pseudomonas syringae tomato by potentiating the transcription of a set of pathogenesis related genes, downstream to a defense signaling pathway involving PTO and PRF, but probably independent of ethylene, jasmonate and salicylic acid. {ECO:0000269|PubMed:10607299, ECO:0000269|PubMed:11768541, ECO:0000269|PubMed:11971137}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: The stronger expression mediated by Pseudomonas syringae tomato during an incompatible interaction (avirulent T1 avrPto strain) than during a compatible one (virulent T1 strain) requires the resistance PTO-R as well as the Pseudomonas resistance and fenthion sensitivity (PRF) gene products. This induction is independent of ethylene (ET), jasmonate (JA) and salicylic acid (SA), and subsequent transcription of PTI5 does not require de novo protein synthesis. Also induced by Xanthomonas oryzae strain PXOA avrXa10, by Pseudomonas fluorescens strain 2-79, by PTO and by cycloheximide. Seems to not be influenced by abiotic stresses (ET, SA, JA and wounding). {ECO:0000269|PubMed:10607299, ECO:0000269|PubMed:9878629}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC216917 | 0.0 | AC216917.1 Populus trichocarpa clone POP066-L06, complete sequence. |