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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Potri.008G073600.1 |
Common Name | POPTR_0008s07360g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family |
ERF |
Protein Properties |
Length: 288aa MW: 31578.7 Da PI: 4.9505 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Potri.008G073600.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 56.8 | 5.4e-18 | 78 | 128 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
+ y+GVr++ +g+WvAeIr+p + r r +lg+f ta+eAa a+++a+++++g
Potri.008G073600.1 78 CNYRGVRQRT-WGKWVAEIREP---N-RgPRLWLGTFPTAYEAALAYDNAARAMYG 128
56*****999.**********8...2.35************************987 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009737 | Biological Process | response to abscisic acid |
GO:0010286 | Biological Process | heat acclimation |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 288 aa
Download sequence Send
to blast |
MGTLIQGSNA TSMSMDSTKK RKRASDKSVA ETLQKWKEYN EHLDAQGDGG NKPVRKVPAK 60 GSKKGCMKGK GGPENSVCNY RGVRQRTWGK WVAEIREPNR GPRLWLGTFP TAYEAALAYD 120 NAARAMYGSC ARLNIPEVVN STSSSKDNFS AVTPSYYSSA ASPADSVTTS THSEVCAYED 180 PNQNVLSQAE DWMTNISSQA EVCEQNVSSQ AEVYEQNVSS QHIEDCSRGV EKNSKLSQDE 240 LKIQSENPSW TNDWHSYGWD EIFSVEELLG DIDSGMTGAE GYFSLGF*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | EF151454 | 0.0 | EF151454.1 Populus trichocarpa DRE-binding protein 2 (DREB2) gene, complete cds. |