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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Potri.005G223300.1 |
Common Name | POPTR_0005s24470g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family |
ERF |
Protein Properties |
Length: 242aa MW: 26800.7 Da PI: 5.0918 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Potri.005G223300.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 56.9 | 5.3e-18 | 107 | 156 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
y+GVr ++ +g+++AeIrd + ng r++lg+f+t e Aa a+++a+++l+g
Potri.005G223300.1 107 YRGVRKRP-WGKYAAEIRDSTRNG--VRVWLGTFDTGETAALAYDQAALSLHG 156
9*******.**********44465..*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 242 aa
Download sequence Send
to blast |
MDHSFFNHPN LEFSPSSPSS SLDLLQDDLL FNPHDNFYLF NSNDSEETLP SDVPFTEAKE 60 SATSVTSDVP PNNKAKDLSE LISSNEIKEK EAAPNATEEN PGREKTYRGV RKRPWGKYAA 120 EIRDSTRNGV RVWLGTFDTG ETAALAYDQA ALSLHGSKAV LNFPIEKVRK SLREMKSGLE 180 DQYWCSPAEA LKKTHSKRRA VSREGKGKGN GLATKEVVVF EDLGAEYLEE LLSSCERGTP 240 Q*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription activator that binds to the GCC-box cis-acting elements found in the promoter regions of ethylene-responsive genes (PubMed:23057995). Acts downstream of MYC2 in the jasmonate-mediated response to Botrytis cinerea infection (PubMed:28733419). With MYC2 forms a transcription module that regulates pathogen-responsive genes (PubMed:28733419). {ECO:0000269|PubMed:23057995, ECO:0000269|PubMed:28733419}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced by wounding and infection with the fungal pathogen Botrytis cinerea. {ECO:0000269|PubMed:28733419}. |