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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Potri.002G164400.1 |
Common Name | POPTR_0002s16590g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family |
WRKY |
Protein Properties |
Length: 355aa MW: 38846.6 Da PI: 6.5969 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Potri.002G164400.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 96.4 | 2e-30 | 169 | 227 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
+D ++WrKYGqK++kgs++pr+YYrC+s+ gC ++k+ver+++dp ++++tY+ eHnh+
Potri.002G164400.1 169 SDVWAWRKYGQKPIKGSPYPRGYYRCSSSkGCLARKQVERNRSDPGMFIVTYTAEHNHP 227
79*************************998****************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 355 aa
Download sequence Send
to blast |
MEDIDWDLHA VVRGCTTSTS TSTTATTTIN SNSNRNGTTS GYRSDYYPQY SCFSGFGSEQ 60 VGHLFSHPDP FETRNVIGEL DELYKPFFPK TQPLLYSPQA CTPISSFSSF ASFNKDLQTQ 120 PKQQQKKSQP KQSLAGSVTS SGNSHTPRSK RRKNQLKKVC QVPAEALSSD VWAWRKYGQK 180 PIKGSPYPRG YYRCSSSKGC LARKQVERNR SDPGMFIVTY TAEHNHPAPT HRNSLAGSTR 240 QKTSTPQAGT SNDSNKPSSP AQPTCSSPAT SLEDELLVQS TTDTELSREE KDITEDDDED 300 ELAGFSEIAV SDDFFAGLEE FVVPATGFFS DHFPASFGLP WHANNNAATA AGSI*
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