 |
Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Phvul.011G082500.1 |
| Common Name | PHAVU_011G082500g |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
|
| Family |
TCP |
| Protein Properties |
Length: 167aa MW: 18021.4 Da PI: 7.6834 |
| Description |
TCP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Phvul.011G082500.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | TCP | 98.9 | 9e-31 | 20 | 116 | 6 | 89 |
TCP 6 drhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg........ 88
++++++hTkv+gR RRv l+ +caar+F+L++eLG+++ ++ti WLl+qa+p+i+ +tgt+ s+++ ++ss ss+s +
Phvul.011G082500.1 20 RSKKDRHTKVNGRERRVLLPPLCAARIFQLTRELGYKTHGETIGWLLRQAEPSIISATGTGISPSMVDVTSSSPSSSS----Psslptlpl 106
579*********************************************************888882221111112222....111224333 PP
TCP 89 .........k 89
+
Phvul.011G082500.1 107 psegdnvvgQ 116
3333333332 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 167 aa
Download sequence Send
to blast |
MASKTPLPLQ ATNTKLPSLR SKKDRHTKVN GRERRVLLPP LCAARIFQLT RELGYKTHGE 60
TIGWLLRQAE PSIISATGTG ISPSMVDVTS SSPSSSSPSS LPTLPLPSEG DNVVGQHASS 120
VHLSTDNEIN SKETFPPFDF DVFANFNVEF SAAEIEMLQS LMTRLG*
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription activator. Binds the promoter core sequence 5'-GGNCC-3'. {ECO:0000269|PubMed:12000681}. |
